Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RPL21P111-201ENST00000418453 477 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AL139396.1-201ENST00000421137 167 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 PPP1R2P5-201ENST00000457256 603 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 PMCHL2-203ENST00000457791 237 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AC145146.1-201ENST00000496370 254 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 MRPS17P9-201ENST00000511924 393 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 RNA5SP402-201ENST00000517148 110 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 FGF7P1-201ENST00000582820 288 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 Z98751.3-201ENST00000604447 521 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 RBM11P1-201ENST00000604951 799 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AC019193.3-201ENST00000609144 554 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 AC046143.2-201ENST00000609789 160 ntBASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NUP54Q7Z3B4 ZNF702P-202ENST00000434269 1966 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 MIR21-201ENST00000362134 72 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 SNORA36A-201ENST00000384221 132 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 RNU2-32P-201ENST00000411193 191 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AL158823.1-201ENST00000418441 478 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AL353572.1-201ENST00000442490 417 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC022616.8-201ENST00000533569 253 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 CYP4A27P-201ENST00000567218 190 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 MIR4790-201ENST00000577799 79 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 POLR3GP2-201ENST00000588366 668 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC005520.5-201ENST00000613926 164 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC063943.3-201ENST00000615562 356 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC005296.1-201ENST00000616145 209 ntBASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.16□□□□□ -2.06
NUP54Q7Z3B4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 Y_RNA.166-201ENST00000363730 102 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 RNU6-1286P-201ENST00000383871 107 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 RNA5SP450-201ENST00000411206 102 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AC012306.1-201ENST00000423267 114 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 MTND2P29-201ENST00000438595 412 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AC021146.2-201ENST00000504736 556 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 ACA59.1-201ENST00000515966 143 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 Y_RNA.682-201ENST00000516457 100 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 MIR4435-1-201ENST00000582552 80 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AC022202.1-201ENST00000613515 211 ntBASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
NUP54Q7Z3B4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 RNA5SP289-201ENST00000362332 137 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 RNU6-845P-201ENST00000362578 103 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 RNU5B-2P-201ENST00000363036 113 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 SNORD32B-201ENST00000364460 84 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 RNU6-968P-201ENST00000384076 107 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 SNORA29-201ENST00000384183 140 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 RNA5SP465-201ENST00000391195 109 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 AL033519.2-201ENST00000403958 392 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 RNU2-48P-201ENST00000410694 191 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 MTND5P5-201ENST00000503764 376 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 SNORA20.3-201ENST00000516880 132 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 RNU1-54P-201ENST00000517181 120 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 MIR4801-201ENST00000582704 82 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 AC243960.4-201ENST00000600532 288 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 AL133216.2-202ENST00000634512 349 ntBASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUP54Q7Z3B4 AL359851.1-201ENST00000569460 4997 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 U3.9-201ENST00000363823 204 ntBASIC2.13□□□□□ -2.07
NUP54Q7Z3B4 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms