Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC023141.11-201ENST00000508864 202 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AC121758.2-201ENST00000553271 193 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AL158827.2-201ENST00000602494 330 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AL034555.1-201ENST00000604816 211 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AL137847.3-201ENST00000611521 109 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 MIR6895-201ENST00000613497 78 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 SCARNA4-201ENST00000629045 128 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 AL691447.3-201ENST00000635020 330 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 SNORD98-201ENST00000636377 67 ntBASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SYNE3Q6ZMZ3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SYNE3Q6ZMZ3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 ZNF299P-201ENST00000406845 1804 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 SNORA29-201ENST00000384183 140 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 RNU6-310P-201ENST00000384655 107 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AL358453.1-201ENST00000422522 250 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC003685.2-201ENST00000422795 395 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 SNORA31.16-201ENST00000516773 139 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 IGLV3-17-201ENST00000519099 244 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC093249.1-201ENST00000567049 203 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 MIR5701-3-201ENST00000578890 82 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 MIR5007-201ENST00000583098 95 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 MIR5690-201ENST00000583739 73 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 MIR5701-1-201ENST00000585138 82 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 MIR5701-2-201ENST00000615634 82 ntBASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SYNE3Q6ZMZ3 MIR449A-201ENST00000362113 91 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 RNU6-595P-201ENST00000363944 107 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 XGY1-201ENST00000381172 446 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.473-201ENST00000384333 102 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.535-201ENST00000384612 99 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 MIR144-201ENST00000384886 86 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 SNORA75.6-201ENST00000391318 127 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 MTCYBP2-201ENST00000407745 171 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 RNA5SP201-201ENST00000410316 124 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.646-201ENST00000410980 101 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 Z82205.1-201ENST00000428456 297 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 MTND3P23-201ENST00000431980 347 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 AL353752.1-201ENST00000454946 260 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 RPL7P42-201ENST00000481005 679 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 AC097473.1-201ENST00000508142 408 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 SNORA25.11-201ENST00000515935 105 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 AC005899.2-201ENST00000584353 90 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 RPL30P11-203ENST00000598995 310 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 Z98751.3-201ENST00000604447 521 ntBASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.7□□□□□ -1.98
SYNE3Q6ZMZ3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RNU4-82P-201ENST00000362443 140 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.67-201ENST00000362870 100 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RNU6-968P-201ENST00000384076 107 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 MTND4P28-201ENST00000426217 387 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 AC236972.2-201ENST00000434979 310 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 GPM6BP3-201ENST00000442797 145 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RPL30P10-201ENST00000488148 337 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 AF186996.7-201ENST00000492781 209 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 HMGB3P3-201ENST00000510526 400 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RNA5SP281-201ENST00000516504 135 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RNA5SP384-201ENST00000516615 116 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RNU6-567P-201ENST00000516746 107 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RNU6-1213P-201ENST00000517075 94 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 AC005014.2-201ENST00000607795 599 ntBASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
SYNE3Q6ZMZ3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 RNA5SP289-201ENST00000362332 137 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 RNU4-15P-201ENST00000362613 141 ntBASIC2.68□□□□□ -1.98
SYNE3Q6ZMZ3 SNORD115-32-201ENST00000364079 82 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms