Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC007215.1-201ENST00000464893 276 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AC027575.1-201ENST00000481064 460 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 RN7SL20P-201ENST00000488827 297 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 HMGN1P13-201ENST00000505795 138 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 SNORA4.4-201ENST00000515921 135 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 MIR2682-201ENST00000580305 110 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 MIR3200-201ENST00000580767 85 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AL080274.1-201ENST00000605565 220 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AC133104.2-201ENST00000615272 193 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 MIR3651-201ENST00000630427 90 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.5-201ENST00000362334 102 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 SNORD115-8-201ENST00000363856 82 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 SNORD115-38-201ENST00000365037 82 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.496-201ENST00000384444 101 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-1093P-201ENST00000391194 107 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 RPS20P15-201ENST00000412792 311 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 EDDM3CP-201ENST00000415977 425 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 IFNA11P-201ENST00000446352 526 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 AC132942.1-201ENST00000486753 483 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-965P-201ENST00000516721 96 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-699P-201ENST00000517081 110 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 RN7SKP57-201ENST00000517248 293 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 AC233702.2-202ENST00000562547 291 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 AC004584.2-201ENST00000570407 410 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 AC090574.1-201ENST00000623186 233 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 AC091925.1-201ENST00000623204 462 ntBASIC2.88□□□□□ -1.95
PPP4R4Q6NUP7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 Z82195.2-201ENST00000612348 18351 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.146-201ENST00000363549 102 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 RNU1-91P-201ENST00000364746 163 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 SNORA67.1-201ENST00000364749 141 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.395-201ENST00000383945 109 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR153-2-201ENST00000385225 87 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 RNA5SP213-201ENST00000391031 106 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 AC004866.1-201ENST00000411748 78 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MTND4P28-201ENST00000426217 387 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 RPL23AP50-201ENST00000434149 455 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 Z75741.1-201ENST00000446793 314 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 RPS27AP9-201ENST00000477681 438 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 AC105758.1-201ENST00000506038 399 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR449C-201ENST00000516047 92 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 RNA5SP137-201ENST00000516833 135 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR3126-201ENST00000577443 74 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 SNRPGP17-201ENST00000603780 214 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR1244-1-201ENST00000612829 85 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR1248-201ENST00000629190 106 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR1244-3-201ENST00000635744 85 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR1244-2-201ENST00000636449 85 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 MIR1244-4-202ENST00000636813 85 ntBASIC2.87□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-222P-201ENST00000362438 107 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.431-201ENST00000384086 102 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 MIR190B-201ENST00000401119 79 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 MTCYBP10-201ENST00000424905 650 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AP000870.1-201ENST00000472927 406 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AC109925.1-201ENST00000478069 331 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 RNU7-175P-201ENST00000515915 61 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-826P-201ENST00000516827 104 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-58P-201ENST00000517143 103 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 RPL12P50-201ENST00000603116 116 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AC100812.1-201ENST00000607622 580 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AC087588.2-201ENST00000617667 426 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AC137590.2-201ENST00000619709 240 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 AC022140.2-201ENST00000623500 188 ntBASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PPP4R4Q6NUP7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 MIR369-201ENST00000362155 70 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 RNA5SP374-201ENST00000362939 125 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-490P-201ENST00000362985 107 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.138-201ENST00000363462 102 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-26P-201ENST00000383985 107 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 U8.22-201ENST00000459141 133 ntBASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.85□□□□□ -1.95
PPP4R4Q6NUP7 ANXA2P1-201ENST00000505539 926 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms