Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RNU5F-3P-201ENST00000363767 117 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RNU1-115P-201ENST00000365329 160 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.358-201ENST00000365491 99 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RNU6-1227P-201ENST00000383981 107 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RNU6-1011P-201ENST00000384668 107 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 MIR181A2-201ENST00000384863 110 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RNU6-159P-201ENST00000391080 106 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RPL21P75-201ENST00000396599 483 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RPL21P28-201ENST00000401418 483 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 MIR548P-201ENST00000408336 84 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.605-201ENST00000410577 105 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RNU7-26P-201ENST00000458980 63 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RPL21P39-201ENST00000463605 483 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC087190.1-201ENST00000484462 480 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC090096.1-201ENST00000489168 390 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC093591.1-201ENST00000491435 481 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 RPL21P16-201ENST00000495531 483 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC091144.1-201ENST00000519573 138 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC090617.3-201ENST00000573670 475 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 MIR5680-201ENST00000577577 84 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.82□□□□□ -1.96
RNF220Q5VTB9 MIR4719-201ENST00000585233 84 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.82□□□□□ -1.96
RNF220Q5VTB9 SNRPGP17-201ENST00000603780 214 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 AC087588.2-201ENST00000617667 426 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 ZNF204P-201ENST00000416749 2397 ntBASIC2.82□□□□□ -1.96
RNF220Q5VTB9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.82□□□□□ -1.96
RNF220Q5VTB9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF220Q5VTB9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.81□□□□□ -1.96
RNF220Q5VTB9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF220Q5VTB9 RNU1-23P-201ENST00000363361 144 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 RNU6-280P-201ENST00000364145 104 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 RNA5SP267-201ENST00000364893 126 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.496-201ENST00000384444 101 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 RNU1-139P-201ENST00000391307 165 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC114482.1-201ENST00000418010 247 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC027124.2-201ENST00000428249 105 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 WARS2P1-201ENST00000429678 537 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.81□□□□□ -1.96
RNF220Q5VTB9 RNU6-1114P-201ENST00000516022 107 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 MIR2355-201ENST00000517199 87 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC022616.8-201ENST00000533569 253 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC092447.9-201ENST00000603395 144 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 TCL6_2.1-201ENST00000615162 119 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 MIR7112-201ENST00000616126 65 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC005562.2-201ENST00000618264 111 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC243829.7-201ENST00000633081 225 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.81□□□□□ -1.96
RNF220Q5VTB9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
RNF220Q5VTB9 AC073346.2-201ENST00000624724 2058 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RNF220Q5VTB9 RNU6-222P-201ENST00000362438 107 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 RNA5SP72-201ENST00000364442 117 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 RNU6-245P-201ENST00000384020 107 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.557-201ENST00000384680 107 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 MIR7-3-201ENST00000384898 110 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF220Q5VTB9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF220Q5VTB9 YME1L1P1-201ENST00000429435 297 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 RNU7-169P-201ENST00000459456 61 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF220Q5VTB9 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF220Q5VTB9 MIR5004-201ENST00000579078 107 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 UBL5P2-201ENST00000583788 219 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF220Q5VTB9 AC006157.1-201ENST00000611750 366 ntBASIC2.8□□□□□ -1.96
RNF220Q5VTB9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 SNORA63.1-201ENST00000362493 131 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.31-201ENST00000362574 102 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.39-201ENST00000362620 98 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 SNORA38-201ENST00000363946 132 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 SNORA18.2-201ENST00000383865 132 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 RNU6-1072P-201ENST00000384703 107 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 RNU6-443P-201ENST00000384780 107 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MIR10B-201ENST00000385011 110 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MIR549A-201ENST00000385268 96 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MIR670-201ENST00000390142 98 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.592-201ENST00000410274 109 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 PMCHL1-202ENST00000423102 261 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 ARL5AP4-201ENST00000430731 512 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MTCYBP6-201ENST00000441810 138 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MIR449C-201ENST00000516047 92 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 RNU6-965P-201ENST00000516721 96 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 RNU2-44P-201ENST00000516795 194 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 RN7SKP295-201ENST00000517264 153 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 RNU6-988P-201ENST00000519081 107 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 AC020661.2-201ENST00000560114 134 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MIR4444-1-201ENST00000581696 74 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MIR3171-201ENST00000584270 74 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 MIR4444-2-201ENST00000584390 74 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 AC005296.1-201ENST00000616145 209 ntBASIC2.79□□□□□ -1.96
RNF220Q5VTB9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF220Q5VTB9 Y_RNA.28-201ENST00000362554 111 ntBASIC2.78□□□□□ -1.96
RNF220Q5VTB9 SNORA71.3-201ENST00000362582 128 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms