Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 RNY4P37-201ENST00000516225 96 ntBASIC0.04□□□□□ -2.4
CHD9Q3L8U1 RNU6-1098P-201ENST00000516772 96 ntBASIC0.04□□□□□ -2.4
CHD9Q3L8U1 AL132657.2-201ENST00000564417 358 ntBASIC0.04□□□□□ -2.4
CHD9Q3L8U1 MIR3136-201ENST00000583498 78 ntBASIC0.04□□□□□ -2.4
CHD9Q3L8U1 AC008993.2-201ENST00000631744 806 ntBASIC0.04□□□□□ -2.4
CHD9Q3L8U1 MIR103A2-201ENST00000362154 78 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 SNORD114-28-201ENST00000363610 72 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 Y_RNA.228-201ENST00000364346 98 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 RNY1P8-201ENST00000383970 114 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AL627311.1-201ENST00000431514 115 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 MTND1P28-201ENST00000435623 950 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AC098869.1-201ENST00000481627 292 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 MTCO3P9-201ENST00000506989 781 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AP001189.2-201ENST00000527320 189 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AC026741.1-201ENST00000605892 482 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 BX284668.6-201ENST00000606899 438 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AP001033.2-201ENST00000609701 1003 ntBASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.03□□□□□ -2.4
CHD9Q3L8U1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.03□□□□□ -2.4
CHD9Q3L8U1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.41
CHD9Q3L8U1 AC092268.1-201ENST00000342691 405 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 RNU6-658P-201ENST00000384606 106 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 MIR601-201ENST00000385256 79 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 MTND4LP14-201ENST00000429447 288 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 USP9YP14-201ENST00000430663 563 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 RPL18AP17-201ENST00000455326 198 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.03□□□□□ -2.41
CHD9Q3L8U1 AC016925.1-201ENST00000458303 298 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 U7.7-201ENST00000459276 60 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 AC027338.1-201ENST00000514840 825 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 RNU6-703P-201ENST00000516946 107 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 SNORA76.2-201ENST00000517095 137 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 DEFB131D-201ENST00000526803 184 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 SLC2A13P1-201ENST00000531560 322 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 AC091805.2-201ENST00000603848 235 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 AL353149.1-201ENST00000610667 244 ntBASIC0.03□□□□□ -2.41
CHD9Q3L8U1 RNU6-487P-201ENST00000365430 104 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 CALM2P3-201ENST00000400429 449 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 UBE2V1P10-201ENST00000414685 269 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL158050.1-201ENST00000416077 457 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC114482.1-201ENST00000418010 247 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 SEPT7P5-201ENST00000434048 306 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC130509.1-201ENST00000464158 433 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 MTCO3P28-201ENST00000513351 515 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC112206.4-201ENST00000515142 405 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 RNU6-572P-201ENST00000516724 80 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 SUMO2P16-201ENST00000519475 264 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 TMF1P1-201ENST00000576058 373 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 MIR4789-201ENST00000577469 82 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 MIR3912-201ENST00000577566 105 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC025449.1-201ENST00000603896 529 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC097065.2-201ENST00000608159 533 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL355816.2-201ENST00000610049 647 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL445264.1-201ENST00000621719 171 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC010615.1-201ENST00000594254 1764 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 U3.9-201ENST00000363823 204 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 RNU6-549P-201ENST00000384433 107 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 RNU6-331P-201ENST00000384724 107 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 MIR587-201ENST00000384845 96 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 MIR520A-201ENST00000384862 85 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL355796.1-201ENST00000406706 323 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 RNU6-1245P-201ENST00000411130 106 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 RPS26P42-201ENST00000413485 326 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL365338.1-201ENST00000422282 858 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL606662.1-201ENST00000445763 553 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL031313.1-201ENST00000448435 256 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC026414.1-201ENST00000504046 698 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC023538.1-201ENST00000534576 736 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC060771.1-201ENST00000582031 164 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL031281.1-201ENST00000604049 488 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC008759.3-201ENST00000613300 508 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 uc_338.34-201ENST00000617467 174 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC068205.3-201ENST00000636385 468 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC006927.4-201ENST00000639187 543 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AC107982.1-201ENST00000507171 1300 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 AL390237.1-201ENST00000404226 1415 ntBASIC0.02□□□□□ -2.41
CHD9Q3L8U1 RNU6-1097P-201ENST00000363586 107 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-1207P-201ENST00000384343 107 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-296P-201ENST00000384608 107 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNU6-1067P-201ENST00000384752 107 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MIR548B-201ENST00000385247 97 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 SNORD65.1-201ENST00000390889 71 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 CBX3P9-201ENST00000402326 552 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 RNA5SP222-201ENST00000411039 105 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MTCO2P8-201ENST00000412213 658 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MTCO3P41-201ENST00000414801 328 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MRPS18CP6-201ENST00000423587 223 ntBASIC0.01□□□□□ -2.41
CHD9Q3L8U1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
CHD9Q3L8U1 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.01□□□□□ -2.41
CHD9Q3L8U1 MTCO3P10-201ENST00000455912 772 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms