Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 Y_RNA.428-201ENST00000384078 102 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.533-201ENST00000384596 114 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 RNU6-748P-201ENST00000384648 107 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 MIR196B-201ENST00000384852 84 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 MIR144-201ENST00000384886 86 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 MIR27B-201ENST00000385129 97 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AP000275.1-201ENST00000411943 390 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC007064.1-201ENST00000412238 351 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC074117.2-201ENST00000417130 397 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 NUP35P1-201ENST00000422734 947 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 MTND3P9-201ENST00000429526 346 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AL160004.2-201ENST00000432935 350 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 RPS12P2-201ENST00000439728 269 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC079354.2-201ENST00000453523 154 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 RPL36AP48-201ENST00000485521 314 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 MRPL42P6-201ENST00000486397 371 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 SNORA25.10-201ENST00000515926 124 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.661-201ENST00000516003 99 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 RNU1-104P-201ENST00000517280 175 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC060766.3-201ENST00000591442 263 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AP001836.1-201ENST00000604675 523 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AL162730.1-201ENST00000605734 292 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 MTND5P9-201ENST00000503854 1755 ntBASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNAI3Q3KNW1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RNY1P16-201ENST00000363063 111 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RNU6-527P-201ENST00000363425 104 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.145-201ENST00000363527 102 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 SNORA5B-201ENST00000363786 132 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RNU6-784P-201ENST00000384330 106 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 SNORD116-20-201ENST00000384529 92 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 MRPL42P3-201ENST00000401492 326 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RNA5SP184-201ENST00000411071 108 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 MRPS18CP6-201ENST00000423587 223 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AL591043.1-201ENST00000432461 424 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC243964.1-201ENST00000441814 261 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC007969.2-201ENST00000441891 191 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AL109933.2-201ENST00000452651 260 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RPL23AP49-201ENST00000492925 468 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RPL22P13-201ENST00000493291 347 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 HMGB3P3-201ENST00000510526 400 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 RNA5SP402-201ENST00000517148 110 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC023442.1-201ENST00000531247 422 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 MYL12BP1-201ENST00000569826 507 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 MIR5701-3-201ENST00000578890 82 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 MIR5701-1-201ENST00000585138 82 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC009318.2-201ENST00000610917 651 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC006157.1-201ENST00000611750 366 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 MIR5701-2-201ENST00000615634 82 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC097372.5-201ENST00000623665 376 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 AC241585.2-209ENST00000638217 143 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 Z75746.1-201ENST00000440243 2080 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 ZNF299P-201ENST00000406845 1804 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 MTND4P1-201ENST00000457501 1466 ntBASIC2.14□□□□□ -2.07
SNAI3Q3KNW1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 MIR6073-201ENST00000352083 89 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.158-201ENST00000363651 101 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 RNU6-595P-201ENST00000363944 107 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 RNU6-99P-201ENST00000364721 107 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.364-201ENST00000365532 101 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 Y_RNA.577-201ENST00000384794 101 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 MIR518C-201ENST00000384822 101 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 U6atac.2-201ENST00000408644 118 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AL353997.1-201ENST00000432936 108 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC099799.1-201ENST00000439809 192 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AL031659.1-201ENST00000447075 539 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC080013.2-201ENST00000460866 323 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC112771.1-201ENST00000463581 102 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 SNORA31.23-201ENST00000517219 133 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 MIR4680-201ENST00000580906 66 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC008737.2-201ENST00000599446 118 ntBASIC2.13□□□□□ -2.07
SNAI3Q3KNW1 AC092447.9-201ENST00000603395 144 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms