Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL356055.1-201ENST00000602528 446 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AC133104.2-201ENST00000615272 193 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AC097372.5-201ENST00000623665 376 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
PDS5AQ29RF7 MTND5P10-201ENST00000603719 1809 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PDS5AQ29RF7 RNU6-784P-201ENST00000384330 106 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 RNU6-1011P-201ENST00000384668 107 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 RNU6-331P-201ENST00000384724 107 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 MIR521-1-201ENST00000384902 87 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 SNORA75.6-201ENST00000391318 127 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 BTF3L4P2-201ENST00000392798 346 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AL139156.1-201ENST00000412785 841 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 EIF4EP2-201ENST00000422816 654 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.52□□□□□ -2.01
PDS5AQ29RF7 MTND3P9-201ENST00000429526 346 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AC007677.1-201ENST00000445757 515 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.52□□□□□ -2.01
PDS5AQ29RF7 SMURF2P1-201ENST00000514992 481 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 RNA5SP384-201ENST00000516615 116 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.52□□□□□ -2.01
PDS5AQ29RF7 MIR5696-201ENST00000578474 85 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 MIR4273-201ENST00000582824 84 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AC008739.2-201ENST00000597006 317 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AC080078.3-201ENST00000605407 463 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AL080274.1-201ENST00000605565 220 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.52□□□□□ -2.01
PDS5AQ29RF7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.52□□□□□ -2.01
PDS5AQ29RF7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PDS5AQ29RF7 AC005336.3-201ENST00000623833 2679 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 Y_RNA.197-201ENST00000364004 102 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 SNORD32A-201ENST00000364805 84 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 Y_RNA.394-201ENST00000383942 103 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 RNU6-1227P-201ENST00000383981 107 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC107626.1-201ENST00000471084 183 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 RNU6-307P-201ENST00000516743 106 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC109446.1-201ENST00000566172 220 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC090897.2-201ENST00000581715 130 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 MIR3124-201ENST00000582636 67 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC009318.2-201ENST00000610917 651 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 uc_338.14-201ENST00000613162 166 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC090971.5-201ENST00000621102 293 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AC099654.7-201ENST00000635788 2127 ntBASIC2.51□□□□□ -2.01
PDS5AQ29RF7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 SNORD50.1-201ENST00000362987 71 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 Y_RNA.395-201ENST00000383945 109 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 RNU6-1222P-201ENST00000384615 107 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 MIR544A-201ENST00000384855 91 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 MIR1289-2-201ENST00000408360 111 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 AL358075.3-201ENST00000426289 226 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 RPL23AP95-201ENST00000426806 265 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 Z82205.1-201ENST00000428456 297 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 AC005534.2-201ENST00000431047 433 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 RNU6-1153P-201ENST00000516760 105 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 AL355877.2-201ENST00000603670 358 ntBASIC2.5□□□□□ -2.01
PDS5AQ29RF7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.5□□□□□ -2.01
PDS5AQ29RF7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PDS5AQ29RF7 RNU6-890P-201ENST00000384121 107 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 AL354751.2-201ENST00000415471 210 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 MTCO2P12-201ENST00000427426 682 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.49□□□□□ -2.01
PDS5AQ29RF7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.49□□□□□ -2.01
PDS5AQ29RF7 MTCYBP6-201ENST00000441810 138 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 FO393415.2-201ENST00000480085 343 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 AC104435.1-201ENST00000483483 166 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 RNU6-470P-201ENST00000515954 104 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 SCARNA16.2-201ENST00000516520 172 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 AC109329.1-201ENST00000518744 317 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.49□□□□□ -2.01
PDS5AQ29RF7 AC096772.1-201ENST00000609146 564 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 UCA1.1-201ENST00000620952 75 ntBASIC2.49□□□□□ -2.01
PDS5AQ29RF7 MIR7843-201ENST00000622274 79 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms