Protein–RNA interactions for Protein: Q16384

SSX1, Protein SSX1, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1Q16384 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1□□□□□ -2.25
SSX1Q16384 AC079140.2-201ENST00000506193 142 ntBASIC1□□□□□ -2.25
SSX1Q16384 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1□□□□□ -2.25
SSX1Q16384 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1□□□□□ -2.25
SSX1Q16384 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1□□□□□ -2.25
SSX1Q16384 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1□□□□□ -2.25
SSX1Q16384 AC084364.2-201ENST00000546924 395 ntBASIC1□□□□□ -2.25
SSX1Q16384 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1□□□□□ -2.25
SSX1Q16384 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1□□□□□ -2.25
SSX1Q16384 AC109446.2-201ENST00000567872 497 ntBASIC1□□□□□ -2.25
SSX1Q16384 MIR4421-201ENST00000578133 69 ntBASIC1□□□□□ -2.25
SSX1Q16384 SNORA59B-202ENST00000578183 701 ntBASIC1□□□□□ -2.25
SSX1Q16384 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1□□□□□ -2.25
SSX1Q16384 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1□□□□□ -2.25
SSX1Q16384 RPL17P51-201ENST00000605218 238 ntBASIC1□□□□□ -2.25
SSX1Q16384 AC009994.1-201ENST00000606889 253 ntBASIC1□□□□□ -2.25
SSX1Q16384 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.99□□□□□ -2.25
SSX1Q16384 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SSX1Q16384 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SSX1Q16384 RNU4-21P-201ENST00000362802 126 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 AL117342.1-201ENST00000404861 406 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 BX295541.1-201ENST00000417774 250 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 ARL5AP1-201ENST00000418991 388 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.99□□□□□ -2.25
SSX1Q16384 AC009474.2-201ENST00000451383 136 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 RPS23P5-201ENST00000495419 428 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.99□□□□□ -2.25
SSX1Q16384 RNU6-567P-201ENST00000516746 107 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 SNORA18.6-201ENST00000516792 115 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 RNA5SP481-201ENST00000516814 122 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.99□□□□□ -2.25
SSX1Q16384 AC090517.1-201ENST00000569307 266 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 AP003465.2-201ENST00000602571 373 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 CTHRC1P1-201ENST00000605383 469 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 MIR3976-201ENST00000606807 139 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 AL078604.3-201ENST00000615580 211 ntBASIC0.99□□□□□ -2.25
SSX1Q16384 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.99□□□□□ -2.25
SSX1Q16384 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SSX1Q16384 RNU1-96P-201ENST00000364163 162 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 Y_RNA.399-201ENST00000383955 105 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 RNU5A-2P-201ENST00000384337 116 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 RNU6-1026P-201ENST00000384465 108 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 RNU6-456P-201ENST00000384493 107 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 RNU6-248P-201ENST00000410720 107 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.98□□□□□ -2.25
SSX1Q16384 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.98□□□□□ -2.25
SSX1Q16384 AC010095.1-201ENST00000443543 144 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AC022364.2-201ENST00000457963 554 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 RN7SKP210-201ENST00000459176 261 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.98□□□□□ -2.25
SSX1Q16384 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AL163973.1-201ENST00000484753 577 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.98□□□□□ -2.25
SSX1Q16384 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.98□□□□□ -2.25
SSX1Q16384 RNU6-415P-201ENST00000516252 97 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AC019288.1-201ENST00000557918 224 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AC015688.6-201ENST00000577737 104 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 MIR3915-201ENST00000578518 97 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 MIR4303-201ENST00000581299 66 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AC064807.4-201ENST00000607201 407 ntBASIC0.98□□□□□ -2.25
SSX1Q16384 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.98□□□□□ -2.25
SSX1Q16384 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SSX1Q16384 SNORD33-201ENST00000362761 85 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 RNU6-181P-201ENST00000363225 107 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 Y_RNA.132-201ENST00000363421 102 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 RNU4-91P-201ENST00000364778 135 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 SNORA72.3-201ENST00000365074 132 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 RNU6-877P-201ENST00000383868 107 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 RNU6-606P-201ENST00000384721 111 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 MIR208B-201ENST00000401172 77 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AP000275.1-201ENST00000411943 390 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.97□□□□□ -2.25
SSX1Q16384 AC012306.1-201ENST00000423267 114 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AC133104.1-201ENST00000429100 218 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.97□□□□□ -2.25
SSX1Q16384 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.97□□□□□ -2.25
SSX1Q16384 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.97□□□□□ -2.25
SSX1Q16384 RNU6-1041P-201ENST00000516254 102 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 RNU6-445P-201ENST00000516949 107 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 RNU6-856P-201ENST00000516959 98 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AC019176.1-201ENST00000518519 225 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.97□□□□□ -2.25
SSX1Q16384 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.97□□□□□ -2.25
SSX1Q16384 DNAJC19P9-201ENST00000555084 351 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.97□□□□□ -2.25
SSX1Q16384 AL360219.1-201ENST00000610230 366 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AL136221.1-201ENST00000621449 509 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AC009161.2-201ENST00000624626 138 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 AC007494.3-201ENST00000624660 743 ntBASIC0.97□□□□□ -2.25
SSX1Q16384 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SSX1Q16384 MTND5P35-201ENST00000557537 1720 ntBASIC0.96□□□□□ -2.26
SSX1Q16384 RNU6-545P-201ENST00000362681 104 ntBASIC0.96□□□□□ -2.26
SSX1Q16384 MIR194-1-201ENST00000384892 85 ntBASIC0.96□□□□□ -2.26
SSX1Q16384 MIR618-201ENST00000385287 98 ntBASIC0.96□□□□□ -2.26
SSX1Q16384 MRPL35P1-201ENST00000404272 572 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms