Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.27□□□□□ -2.37
CACNA1EQ15878 RNU7-51P-201ENST00000516560 62 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC026616.1-201ENST00000523157 525 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AP003181.2-201ENST00000528941 181 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC093012.1-202ENST00000549403 582 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.27□□□□□ -2.37
CACNA1EQ15878 MIR3169-201ENST00000578032 83 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 BNIP3P9-201ENST00000603714 553 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC069114.2-201ENST00000604699 304 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC099785.1-201ENST00000605697 437 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AL022345.2-201ENST00000606307 135 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC091965.4-201ENST00000607691 587 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC092106.3-201ENST00000611308 722 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AL121895.2-201ENST00000619558 447 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AP000720.1-201ENST00000625091 483 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 U4.7-201ENST00000638126 106 ntBASIC0.27□□□□□ -2.37
CACNA1EQ15878 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.27□□□□□ -2.37
CACNA1EQ15878 RNU6-23P-201ENST00000363283 107 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 SNORD31B-201ENST00000364977 69 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 RNU6-25P-201ENST00000383873 107 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 RNU6-48P-201ENST00000384161 107 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 RNU6-15P-201ENST00000384534 107 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 RNU6-29P-201ENST00000384637 107 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 MIR1283-1-201ENST00000408494 87 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 snoU13.11-201ENST00000459219 104 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 RNU6-1069P-201ENST00000516612 133 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC022868.1-201ENST00000517767 391 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC022616.8-201ENST00000533569 253 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL590229.1-201ENST00000603497 542 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL158050.2-201ENST00000605336 568 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL159153.1-201ENST00000619688 317 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 Y_RNA.46-201ENST00000362695 102 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 U3.4-201ENST00000363352 213 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 SMIM11P1-201ENST00000369586 178 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 RNU6-1286P-201ENST00000383871 107 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 SNORA29-201ENST00000384183 140 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 MIR19B1-201ENST00000384829 87 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 SNORA12.2-201ENST00000391040 156 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 RNU6-1025P-201ENST00000410629 104 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 RPS25P9-201ENST00000435591 252 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC245047.7-201ENST00000440265 293 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 snoU13.25-201ENST00000458945 104 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 snoU13.14-201ENST00000459372 104 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 RPS26P48-201ENST00000491713 339 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC112206.3-201ENST00000514578 389 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC090517.1-201ENST00000569307 266 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 MIR5006-201ENST00000583027 110 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC091135.1-201ENST00000585943 307 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL162730.1-201ENST00000605734 292 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL139022.2-201ENST00000606934 443 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC009509.4-201ENST00000619202 509 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC026585.1-201ENST00000619582 524 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC024940.5-201ENST00000622889 474 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AL157786.1-207ENST00000627771 695 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 AC068205.3-201ENST00000636385 468 ntBASIC0.26□□□□□ -2.37
CACNA1EQ15878 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CACNA1EQ15878 RNU5E-10P-201ENST00000363506 118 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 Y_RNA.559-201ENST00000384686 107 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 MIR544A-201ENST00000384855 91 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 MIR10A-201ENST00000385043 110 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 RNU6-575P-201ENST00000411326 105 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 MTCO1P17-201ENST00000411522 491 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CACNA1EQ15878 LARP1BP3-201ENST00000437229 869 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC243964.1-201ENST00000441814 261 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 MTND1P9-201ENST00000453775 944 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC093850.1-201ENST00000454121 251 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC093809.1-201ENST00000509155 340 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC116353.3-201ENST00000511215 249 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 RNVU1-2-201ENST00000516326 135 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AL391001.1-201ENST00000602747 715 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC078795.3-201ENST00000602913 472 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 Z99289.3-201ENST00000605586 594 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 RMST_3.1-201ENST00000611651 109 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.25□□□□□ -2.37
CACNA1EQ15878 AL359547.2-201ENST00000615810 418 ntBASIC0.25□□□□□ -2.37
CACNA1EQ15878 AC008147.4-201ENST00000617570 1204 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms