Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 OR2AQ1P-201ENST00000451972 200 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 MTCO3P8-201ENST00000453691 755 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.21□□□□□ -1.9
SF3B3Q15393 AC008413.1-201ENST00000511864 177 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 SNORA43.2-201ENST00000516652 128 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 SNORA31.18-201ENST00000517043 134 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 AP004607.1-201ENST00000524456 203 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 HSPE1P20-201ENST00000538133 289 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 MIR3668-201ENST00000582138 75 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 AC019159.1-201ENST00000605094 187 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 AC090425.1-201ENST00000610007 140 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.21□□□□□ -1.9
SF3B3Q15393 U4.3-201ENST00000621047 82 ntBASIC3.21□□□□□ -1.9
SF3B3Q15393 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SF3B3Q15393 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.21□□□□□ -1.9
SF3B3Q15393 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SF3B3Q15393 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B3Q15393 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.2□□□□□ -1.9
SF3B3Q15393 RNU6-898P-201ENST00000365627 104 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 Y_RNA.526-201ENST00000384572 110 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 MIR1261-201ENST00000408659 82 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 Y_RNA.592-201ENST00000410274 109 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 AP000275.1-201ENST00000411943 390 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B3Q15393 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.2□□□□□ -1.9
SF3B3Q15393 DYNLT3P2-201ENST00000442517 295 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 FCF1P4-201ENST00000448326 183 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 RNA5SP24-201ENST00000516478 95 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 RNU6-1271P-201ENST00000517049 105 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 AC109329.1-201ENST00000518744 317 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 AL590705.4-201ENST00000532209 134 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 AC007536.1-201ENST00000533382 349 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.2□□□□□ -1.9
SF3B3Q15393 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.2□□□□□ -1.9
SF3B3Q15393 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
SF3B3Q15393 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.2□□□□□ -1.9
SF3B3Q15393 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.2□□□□□ -1.9
SF3B3Q15393 AC010620.2-201ENST00000600135 313 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 MIR8062-201ENST00000621515 85 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 AC064859.1-201ENST00000624741 174 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 AC110079.1-202ENST00000635213 138 ntBASIC3.2□□□□□ -1.9
SF3B3Q15393 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SF3B3Q15393 Y_RNA.123-201ENST00000363338 102 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 Y_RNA.214-201ENST00000364201 112 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 SNORA70B-201ENST00000384210 135 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SF3B3Q15393 AL512633.1-201ENST00000399931 655 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 MTCYBP2-201ENST00000407745 171 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 RNA5SP492-201ENST00000411330 114 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.19□□□□□ -1.9
SF3B3Q15393 AL513477.1-202ENST00000417061 214 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 AC244505.4-201ENST00000434905 287 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.19□□□□□ -1.9
SF3B3Q15393 SSXP5-201ENST00000443473 287 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 RN7SKP210-201ENST00000459176 261 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.19□□□□□ -1.9
SF3B3Q15393 AC010186.2-204ENST00000537668 439 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 AMZ2P1-203ENST00000565833 850 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 RAC1P9-201ENST00000604990 392 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.19□□□□□ -1.9
SF3B3Q15393 MIR6134-201ENST00000617606 109 ntBASIC3.19□□□□□ -1.9
SF3B3Q15393 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SF3B3Q15393 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.19□□□□□ -1.9
SF3B3Q15393 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SF3B3Q15393 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SF3B3Q15393 RNA5SP289-201ENST00000362332 137 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 RNU6-884P-201ENST00000363889 107 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 RNU4-50P-201ENST00000364361 141 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 Y_RNA.396-201ENST00000383949 103 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 RNU6-472P-201ENST00000384299 107 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 SNORA51.11-201ENST00000384442 131 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 RNU6-1035P-201ENST00000384477 107 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 SNORA12.2-201ENST00000391040 156 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 SNORA3.2-201ENST00000408221 125 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 RPL19P1-201ENST00000411635 428 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 MTCO3P19-201ENST00000415864 321 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 ELOCP20-201ENST00000422460 345 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 MTCO3P29-201ENST00000432119 779 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 AL121890.1-201ENST00000435457 205 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.18□□□□□ -1.9
SF3B3Q15393 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.18□□□□□ -1.9
SF3B3Q15393 AC104581.2-201ENST00000572227 430 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 AC060766.3-201ENST00000591442 263 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 AC062037.2-201ENST00000610137 73 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 AL159153.1-201ENST00000619688 317 ntBASIC3.18□□□□□ -1.9
SF3B3Q15393 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SF3B3Q15393 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SF3B3Q15393 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SF3B3Q15393 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SF3B3Q15393 AP000560.1-201ENST00000624150 1937 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.17□□□□□ -1.9
SF3B3Q15393 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 SNORA26.7-201ENST00000391288 122 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 BTF3L4P2-201ENST00000392798 346 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SF3B3Q15393 RNA5SP344-201ENST00000411081 104 ntBASIC3.17□□□□□ -1.9
SF3B3Q15393 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms