Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 EIF4E2P1-201ENST00000393781 255 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.59□□□□□ -2.15
RAB40BQ12829 EIF4EP2-201ENST00000422816 654 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 AC012306.1-201ENST00000423267 114 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.59□□□□□ -2.15
RAB40BQ12829 MRPS10P2-201ENST00000431226 381 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 SEPT14P3-201ENST00000439401 183 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 AL359672.1-201ENST00000442302 409 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 AL732372.2-207ENST00000445840 183 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 SEPT14P2-201ENST00000453405 183 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 RPL9P9-202ENST00000466501 579 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.59□□□□□ -2.15
RAB40BQ12829 ATP5EP1-201ENST00000510257 156 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 SEPT14P4-201ENST00000513445 186 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 RNU5F-4P-201ENST00000516581 114 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 RNU2-44P-201ENST00000516795 194 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 SNORD60.2-201ENST00000516883 86 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 FO082796.1-201ENST00000523795 183 ntBASIC1.59□□□□□ -2.15
RAB40BQ12829 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.59□□□□□ -2.15
RAB40BQ12829 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
RAB40BQ12829 Y_RNA.231-201ENST00000364358 102 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 SNORD114-6-201ENST00000364393 72 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 RNU6-1317P-201ENST00000364582 104 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 RNU6-214P-201ENST00000384130 107 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 RNU6-780P-201ENST00000391030 104 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 RNU4-26P-201ENST00000410270 107 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 RNU6-1068P-201ENST00000410958 103 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 AC123900.1-201ENST00000420390 96 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 SNRPEP8-201ENST00000442866 260 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 MTATP6P26-201ENST00000445926 662 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 RPS29P27-201ENST00000463711 170 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.58□□□□□ -2.16
RAB40BQ12829 Y_RNA.704-201ENST00000516851 102 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.58□□□□□ -2.16
RAB40BQ12829 AL157687.1-201ENST00000554853 619 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.58□□□□□ -2.16
RAB40BQ12829 AC090517.1-201ENST00000569307 266 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 MIR3169-201ENST00000578032 83 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 MIR4298-201ENST00000584380 73 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 AC064807.4-201ENST00000607201 407 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 AC005520.5-201ENST00000613926 164 ntBASIC1.58□□□□□ -2.16
RAB40BQ12829 FER-210ENST00000628534 558 ntTSL 5 BASIC1.58□□□□□ -2.16
RAB40BQ12829 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.57□□□□□ -2.16
RAB40BQ12829 CBX3P1-201ENST00000325243 554 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 Y_RNA.194-201ENST00000363985 102 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
RAB40BQ12829 SNORA32.2-201ENST00000384049 122 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 SNORA48.1-201ENST00000390879 135 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.57□□□□□ -2.16
RAB40BQ12829 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.57□□□□□ -2.16
RAB40BQ12829 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.57□□□□□ -2.16
RAB40BQ12829 MTND1P1-201ENST00000445453 368 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 snoU13.6-201ENST00000458785 104 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 RNU7-14P-201ENST00000459331 62 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 AC007547.1-201ENST00000462177 490 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 RPL38P4-201ENST00000502376 214 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 AC019235.1-201ENST00000503847 207 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 RNU6-1281P-201ENST00000516223 105 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 RNU6-1098P-201ENST00000516772 96 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.57□□□□□ -2.16
RAB40BQ12829 AC087441.2-201ENST00000529141 262 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.57□□□□□ -2.16
RAB40BQ12829 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.57□□□□□ -2.16
RAB40BQ12829 AC116312.1-201ENST00000606841 314 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 AC009994.1-201ENST00000606889 253 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 OR4G1P-203ENST00000641984 1631 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RAB40BQ12829 AC245060.5-201ENST00000610778 3293 ntBASIC1.57□□□□□ -2.16
RAB40BQ12829 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RAB40BQ12829 SNORD114-1-201ENST00000362705 72 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 Y_RNA.167-201ENST00000363735 109 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 RNU6-1093P-201ENST00000391194 107 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AC019129.1-201ENST00000403786 261 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.56□□□□□ -2.16
RAB40BQ12829 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.56□□□□□ -2.16
RAB40BQ12829 ERLEC1P1-201ENST00000433806 578 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AMD1P1-201ENST00000457220 922 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 RNU1-131P-201ENST00000458943 161 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 snoU13.15-201ENST00000459407 104 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 TOMM22P6-201ENST00000465035 409 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AC114801.2-201ENST00000503825 781 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AC092436.3-201ENST00000511788 257 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 RNVU1-2-201ENST00000516326 135 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 RNU6-1332P-201ENST00000516666 104 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AC016256.1-201ENST00000547971 354 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 SCOCP1-201ENST00000554676 349 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 HMGB1P33-201ENST00000563485 527 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AC104581.2-201ENST00000572227 430 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.56□□□□□ -2.16
RAB40BQ12829 AL162413.1-201ENST00000603198 110 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 RPL17P51-201ENST00000605218 238 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 RNU6-89P-201ENST00000606519 100 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AC004492.1-201ENST00000607036 742 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.56□□□□□ -2.16
RAB40BQ12829 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.56□□□□□ -2.16
RAB40BQ12829 AC068137.3-201ENST00000639191 341 ntBASIC1.56□□□□□ -2.16
RAB40BQ12829 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RAB40BQ12829 AC121333.1-201ENST00000567488 2709 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms