Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC098826.2-201ENST00000452011 651 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 HMGB1P29-201ENST00000505659 499 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC108078.1-201ENST00000508073 725 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 RNA5SP401-201ENST00000515920 127 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 Y_RNA.688-201ENST00000516565 95 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC090115.3-201ENST00000553218 849 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 VN1R80P-201ENST00000597126 338 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC010620.1-201ENST00000601088 1102 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC005609.4-201ENST00000625071 447 ntBASIC1.56□□□□□ -2.16
TNFRSF17Q02223 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
TNFRSF17Q02223 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFRSF17Q02223 SNORD114-6-201ENST00000364393 72 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 Y_RNA.255-201ENST00000364581 97 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 RNU6-1106P-201ENST00000390845 107 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 MTCYBP2-201ENST00000407745 171 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AC123900.1-201ENST00000420390 96 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AC078809.1-201ENST00000427601 140 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AC016632.1-201ENST00000503994 196 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 Y_RNA.676-201ENST00000516393 96 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 SNORA31.17-201ENST00000516953 127 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.55□□□□□ -2.16
TNFRSF17Q02223 MIR3923-201ENST00000579521 83 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 MIR3683-201ENST00000580847 82 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AP000942.3-201ENST00000603702 160 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AC092747.3-201ENST00000603769 301 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 AP001836.1-201ENST00000604675 523 ntBASIC1.55□□□□□ -2.16
TNFRSF17Q02223 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 RNU4-66P-201ENST00000365199 138 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 RNU6-1103P-201ENST00000384150 107 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 Y_RNA.582-201ENST00000391023 95 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 RN7SKP101-201ENST00000411376 320 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AL663109.1-201ENST00000411498 844 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 MTCO1P44-201ENST00000441935 243 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 SNRPEP8-201ENST00000442866 260 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AL357134.1-201ENST00000445848 426 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 MTCO2P18-201ENST00000457151 658 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 TPTE2P5-203ENST00000458118 728 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 RN7SKP210-201ENST00000459176 261 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 RNU7-138P-201ENST00000459479 64 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC130509.1-201ENST00000464158 433 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC087477.1-201ENST00000465747 340 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 MTCO3P38-201ENST00000468910 766 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC010409.1-201ENST00000487382 476 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC104576.1-201ENST00000524225 88 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC025423.5-201ENST00000550230 219 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC009509.4-201ENST00000619202 509 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.54□□□□□ -2.16
TNFRSF17Q02223 MTND4P23-201ENST00000447723 1363 ntBASIC1.54□□□□□ -2.16
TNFRSF17Q02223 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
TNFRSF17Q02223 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.53□□□□□ -2.16
TNFRSF17Q02223 AC092268.1-201ENST00000342691 405 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 Y_RNA.164-201ENST00000363709 102 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 RNU6-378P-201ENST00000384324 107 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 SNORA17.3-201ENST00000391159 129 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 MIR208B-201ENST00000401172 77 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 Y_RNA.595-201ENST00000410403 105 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 RN7SKP61-201ENST00000410642 295 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 MTCO3P41-201ENST00000414801 328 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFRSF17Q02223 snoU13.9-201ENST00000458927 103 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 ATP5EP1-201ENST00000510257 156 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFRSF17Q02223 RNU6-323P-201ENST00000521915 107 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.53□□□□□ -2.16
TNFRSF17Q02223 MIR3941-201ENST00000582572 103 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 Z98751.3-201ENST00000604447 521 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 AL357078.3-201ENST00000607528 618 ntBASIC1.53□□□□□ -2.16
TNFRSF17Q02223 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.53□□□□□ -2.16
TNFRSF17Q02223 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.53□□□□□ -2.17
TNFRSF17Q02223 MTND5P9-201ENST00000503854 1755 ntBASIC1.52□□□□□ -2.17
TNFRSF17Q02223 AC009541.1-201ENST00000438279 2662 ntBASIC1.52□□□□□ -2.17
TNFRSF17Q02223 Y_RNA.67-201ENST00000362870 100 ntBASIC1.52□□□□□ -2.17
TNFRSF17Q02223 U3.9-201ENST00000363823 204 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms