Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 HSPE1P18-201ENST00000517602 280 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 AC118273.2-201ENST00000532092 465 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 SNRPGP18-201ENST00000553000 214 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.22□□□□□ -2.05
CDK3Q00526 AL049779.4-201ENST00000604500 156 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.22□□□□□ -2.05
CDK3Q00526 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
CDK3Q00526 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.22□□□□□ -2.05
CDK3Q00526 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.22□□□□□ -2.05
CDK3Q00526 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CDK3Q00526 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.21□□□□□ -2.06
CDK3Q00526 SNORD50.1-201ENST00000362987 71 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 SNORD81.2-201ENST00000365153 76 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 MIR208B-201ENST00000401172 77 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 MTCYBP2-201ENST00000407745 171 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 RNA5SP201-201ENST00000410316 124 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 RNA5SP494-201ENST00000410653 129 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.21□□□□□ -2.06
CDK3Q00526 CBX3P6-201ENST00000430257 527 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 AC116337.1-201ENST00000509680 687 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 SNORA4.4-201ENST00000515921 135 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 RNU6-667P-201ENST00000517186 102 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 AC022616.8-201ENST00000533569 253 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 CYCSP26-201ENST00000534107 320 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 AC018630.3-201ENST00000542637 96 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.21□□□□□ -2.06
CDK3Q00526 AC109446.1-201ENST00000566172 220 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 AC005730.3-201ENST00000583067 366 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.21□□□□□ -2.06
CDK3Q00526 PCGEM1.1-201ENST00000613431 131 ntBASIC2.21□□□□□ -2.06
CDK3Q00526 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.21□□□□□ -2.06
CDK3Q00526 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.21□□□□□ -2.06
CDK3Q00526 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDK3Q00526 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CDK3Q00526 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDK3Q00526 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDK3Q00526 RNU5B-2P-201ENST00000363036 113 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 SNORA72.1-201ENST00000363485 129 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 RNU6-1059P-201ENST00000363752 98 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDK3Q00526 RNU1-138P-201ENST00000384093 164 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 RNU1-52P-201ENST00000384190 164 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 RNU6-378P-201ENST00000384324 107 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 DPH3P2-201ENST00000422618 250 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 USP9YP30-201ENST00000430729 455 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 CR769767.1-201ENST00000436337 346 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CDK3Q00526 AC096638.1-201ENST00000444678 216 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 AL513124.1-201ENST00000450410 614 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 AC079354.2-201ENST00000453523 154 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 FO393415.2-201ENST00000480085 343 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
CDK3Q00526 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.2□□□□□ -2.06
CDK3Q00526 SNORD14A-201ENST00000606526 91 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 AL355073.2-201ENST00000612106 557 ntBASIC2.2□□□□□ -2.06
CDK3Q00526 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDK3Q00526 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.19□□□□□ -2.06
CDK3Q00526 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CDK3Q00526 U3.9-201ENST00000363823 204 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 RNU6-743P-201ENST00000364151 106 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 SNORD32B-201ENST00000364460 84 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 Y_RNA.303-201ENST00000364998 94 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 Y_RNA.339-201ENST00000365325 102 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 MIR1294-201ENST00000408503 142 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 RPL37P10-201ENST00000412884 288 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 SUMO1P4-201ENST00000429430 302 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 AL139109.1-201ENST00000455491 297 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 AF186996.7-201ENST00000492781 209 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 RPS29P21-201ENST00000496272 170 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.19□□□□□ -2.06
CDK3Q00526 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.19□□□□□ -2.06
CDK3Q00526 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.19□□□□□ -2.06
CDK3Q00526 AC005741.1-201ENST00000511094 432 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 MIR449C-201ENST00000516047 92 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 SNORA31.11-201ENST00000516528 139 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 RNU6-1016P-201ENST00000516689 94 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 RNA5SP402-201ENST00000517148 110 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 AC034114.1-201ENST00000520293 285 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.19□□□□□ -2.06
CDK3Q00526 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.19□□□□□ -2.06
CDK3Q00526 MIR4648-201ENST00000580107 72 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 MIR4273-201ENST00000582824 84 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 AC009318.2-201ENST00000610917 651 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 AC009831.4-201ENST00000620744 325 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 FO624990.1-201ENST00000636373 85 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 TPTEP1-208ENST00000636884 213 ntBASIC2.19□□□□□ -2.06
CDK3Q00526 Z82209.1-201ENST00000422141 2135 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 MTND5P9-201ENST00000503854 1755 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.18□□□□□ -2.06
CDK3Q00526 Y_RNA.473-201ENST00000384333 102 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 RNU6-1093P-201ENST00000391194 107 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 RNU2-48P-201ENST00000410694 191 ntBASIC2.18□□□□□ -2.06
CDK3Q00526 EIF4EP2-201ENST00000422816 654 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms