Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.11□□□□□ -2.07
CX3CL1P78423 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CX3CL1P78423 Y_RNA.58-201ENST00000362807 102 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 Y_RNA.154-201ENST00000363624 102 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 SNORD115-32-201ENST00000364079 82 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 RNY3P1-201ENST00000365085 102 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 RNY3-201ENST00000365484 102 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 Y_RNA.490-201ENST00000384413 102 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 MIR32-201ENST00000384965 70 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 MTCYBP4-201ENST00000401524 249 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 MIR1294-201ENST00000408503 142 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 RNA5SP181-201ENST00000410246 98 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 RNU2-48P-201ENST00000410694 191 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CL1P78423 AL353997.1-201ENST00000432936 108 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 MTCO3P10-201ENST00000455912 772 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 snoU13.30-201ENST00000458951 104 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 MIR449C-201ENST00000516047 92 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 RNU6-667P-201ENST00000517186 102 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AL590705.4-201ENST00000532209 134 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CL1P78423 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CL1P78423 AC090517.1-201ENST00000569307 266 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.11□□□□□ -2.07
CX3CL1P78423 MIR4795-201ENST00000584182 89 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AC005899.2-201ENST00000584353 90 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AL033523.1-201ENST00000605153 153 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AC137590.2-201ENST00000619709 240 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 AL359697.1-201ENST00000624879 587 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 FO624990.1-201ENST00000636373 85 ntBASIC2.11□□□□□ -2.07
CX3CL1P78423 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CL1P78423 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.11□□□□□ -2.07
CX3CL1P78423 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CX3CL1P78423 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.11□□□□□ -2.07
CX3CL1P78423 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CX3CL1P78423 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CX3CL1P78423 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CX3CL1P78423 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CX3CL1P78423 SNORA80A-201ENST00000363922 136 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 RNU6-890P-201ENST00000384121 107 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 RNU1-148P-201ENST00000384472 162 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 SNORA75.6-201ENST00000391318 127 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 ARL5AP4-201ENST00000430731 512 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 CR769767.1-201ENST00000436337 346 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.1□□□□□ -2.07
CX3CL1P78423 RPL30P15-201ENST00000457129 321 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 Y_RNA.653-201ENST00000459091 95 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 RN7SKP210-201ENST00000459176 261 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 SNORD19B-201ENST00000459623 84 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AC097473.1-201ENST00000508142 408 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 RNU6-307P-201ENST00000516743 106 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 Y_RNA.718-201ENST00000517110 102 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AC034114.1-201ENST00000520293 285 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AP000889.1-201ENST00000530968 660 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 MIR5701-3-201ENST00000578890 82 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.1□□□□□ -2.07
CX3CL1P78423 MIR5701-1-201ENST00000585138 82 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AC016727.2-201ENST00000603988 621 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AL049779.4-201ENST00000604500 156 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 RMST_6.1-201ENST00000611980 203 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 MIR5701-2-201ENST00000615634 82 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 AL132822.1-201ENST00000617063 513 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.1□□□□□ -2.07
CX3CL1P78423 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CX3CL1P78423 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.1□□□□□ -2.07
CX3CL1P78423 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.09□□□□□ -2.07
CX3CL1P78423 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CX3CL1P78423 RNU6-1159P-201ENST00000362933 107 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 RNY1P16-201ENST00000363063 111 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 RNA5SP393-201ENST00000363423 117 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 SNORA41-201ENST00000384675 132 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 MIR549A-201ENST00000385268 96 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 AL356057.3-201ENST00000402607 340 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 AC022028.1-201ENST00000412054 408 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 SUMO1P4-201ENST00000429430 302 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 AC011816.1-201ENST00000441346 546 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.09□□□□□ -2.07
CX3CL1P78423 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.09□□□□□ -2.07
CX3CL1P78423 SRIP1-201ENST00000489235 288 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.09□□□□□ -2.07
CX3CL1P78423 AC096725.1-201ENST00000514266 313 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 SNORA4.4-201ENST00000515921 135 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 Y_RNA.675-201ENST00000516389 149 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 DEFB131C-201ENST00000528817 165 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.09□□□□□ -2.07
CX3CL1P78423 AC104581.2-201ENST00000572227 430 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 7SK.7-201ENST00000603504 247 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 AC104985.2-201ENST00000620598 500 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 AC092608.2-201ENST00000624427 218 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 MIR1248-201ENST00000629190 106 ntBASIC2.09□□□□□ -2.07
CX3CL1P78423 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.08
CX3CL1P78423 RNU6-859P-201ENST00000362728 107 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 Y_RNA.405-201ENST00000383979 100 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 RNU6-26P-201ENST00000383985 107 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 RNU1-138P-201ENST00000384093 164 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 Y_RNA.451-201ENST00000384200 100 ntBASIC2.08□□□□□ -2.08
CX3CL1P78423 Y_RNA.524-201ENST00000384564 100 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms