Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCR4P61073 Z82205.1-201ENST00000428456 297 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.66□□□□□ -2.3
CXCR4P61073 Z73417.1-201ENST00000447373 778 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AC013470.1-201ENST00000453438 462 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 RPL39P38-201ENST00000467018 153 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCR4P61073 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCR4P61073 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
CXCR4P61073 RNU6-237P-201ENST00000515985 71 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 RNU6-165P-201ENST00000517170 99 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 MTCO2P2-201ENST00000591258 225 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AL359821.1-201ENST00000605519 182 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AL157392.4-201ENST00000609756 345 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AC104010.1-201ENST00000616889 150 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AL133216.2-202ENST00000634512 349 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 AL445984.1-201ENST00000637834 659 ntBASIC0.66□□□□□ -2.3
CXCR4P61073 BX322639.1-202ENST00000423987 2213 ntBASIC0.65□□□□□ -2.3
CXCR4P61073 SNORD114-27-201ENST00000363766 70 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 SNORD114-24-201ENST00000365029 72 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 Y_RNA.338-201ENST00000365320 114 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 MIR608-201ENST00000384820 100 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 RPS29P13-201ENST00000402041 169 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 Y_RNA.608-201ENST00000410647 95 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 RPL23AP95-201ENST00000426806 265 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 USP9YP28-201ENST00000435142 589 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.65□□□□□ -2.31
CXCR4P61073 HMGN1P12-201ENST00000499125 195 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 AC116562.3-201ENST00000506136 177 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 AF131216.2-201ENST00000512316 564 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 TRMT112P2-201ENST00000512910 132 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 SNORA31.4-201ENST00000516049 129 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 RN7SKP265-201ENST00000516448 223 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 RNU2-34P-201ENST00000516534 121 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 SUMO2P16-201ENST00000519475 264 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.65□□□□□ -2.31
CXCR4P61073 AC068587.5-201ENST00000528506 175 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 Z98751.3-201ENST00000604447 521 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 AC105129.3-201ENST00000605455 485 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 AC009994.1-201ENST00000606889 253 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 AC064807.4-201ENST00000607201 407 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 RNU4-5P-201ENST00000607255 135 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 AC005520.5-201ENST00000613926 164 ntBASIC0.65□□□□□ -2.31
CXCR4P61073 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
CXCR4P61073 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.64□□□□□ -2.31
CXCR4P61073 RNY1P12-201ENST00000364251 105 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 RNU6-392P-201ENST00000364926 101 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 SNORD115-7-201ENST00000365306 82 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 MIR300-201ENST00000401138 83 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.64□□□□□ -2.31
CXCR4P61073 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.64□□□□□ -2.31
CXCR4P61073 SNAP23P1-201ENST00000433229 246 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 HMGN1P7-201ENST00000491722 313 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 PDCD5P2-201ENST00000507570 312 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 RNU6-197P-201ENST00000516680 100 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.64□□□□□ -2.31
CXCR4P61073 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.64□□□□□ -2.31
CXCR4P61073 MIR4498-201ENST00000577599 66 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 MIR4509-3-201ENST00000578671 94 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 MIR4742-201ENST00000581069 85 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 MIR4509-2-201ENST00000583920 94 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 AC008751.2-201ENST00000597885 980 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 Z99289.3-201ENST00000605586 594 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 MIR4509-1-201ENST00000618224 94 ntBASIC0.64□□□□□ -2.31
CXCR4P61073 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CXCR4P61073 RNU6-545P-201ENST00000362681 104 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 RNU6-1200P-201ENST00000384162 107 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 RNU6-950P-201ENST00000384651 107 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.63□□□□□ -2.31
CXCR4P61073 RAB28P5-201ENST00000427490 651 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 MTATP6P16-201ENST00000434543 526 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 GTF2IP13-201ENST00000438487 386 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 C1DP4-201ENST00000455429 424 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AC005840.1-201ENST00000498412 377 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AC091435.1-201ENST00000505442 584 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 RNU6-113P-201ENST00000516653 101 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AC004817.2-201ENST00000561794 651 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AL121992.2-201ENST00000606262 256 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AC008250.2-201ENST00000615261 205 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AL136221.1-201ENST00000621449 509 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AC138649.3-201ENST00000622154 254 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 AL450472.1-202ENST00000637286 180 ntBASIC0.63□□□□□ -2.31
CXCR4P61073 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CXCR4P61073 SNORA18.2-201ENST00000383865 132 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 Y_RNA.504-201ENST00000384481 104 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 RNU6-910P-201ENST00000390844 107 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 SNORD12-201ENST00000391002 90 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 MIR208B-201ENST00000401172 77 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 AC114482.1-201ENST00000418010 247 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 AC063976.4-201ENST00000421971 163 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CXCR4P61073 AC008628.2-201ENST00000502605 298 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.62□□□□□ -2.31
CXCR4P61073 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.62□□□□□ -2.31
CXCR4P61073 SNORA31.2-201ENST00000516019 134 ntBASIC0.62□□□□□ -2.31
CXCR4P61073 AC022616.3-201ENST00000523940 148 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms