Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AL603910.2-201ENST00000407268 136 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 RNA5SP201-201ENST00000410316 124 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.97□□□□□ -1.93
CLRN1P58418 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.97□□□□□ -1.93
CLRN1P58418 AC006445.1-201ENST00000491925 405 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 RNU7-110P-201ENST00000516891 62 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 MIR4423-201ENST00000580922 80 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 MIR3922-201ENST00000585192 84 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.97□□□□□ -1.93
CLRN1P58418 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.97□□□□□ -1.93
CLRN1P58418 SNORD113-5-201ENST00000607261 78 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 SNORA50A-202ENST00000629536 136 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 MIR7153-201ENST00000637758 57 ntBASIC2.97□□□□□ -1.93
CLRN1P58418 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLRN1P58418 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLRN1P58418 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.97□□□□□ -1.93
CLRN1P58418 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLRN1P58418 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLRN1P58418 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLRN1P58418 Y_RNA.54-201ENST00000362766 105 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 Y_RNA.352-201ENST00000365439 102 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 RNU6-793P-201ENST00000384233 104 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 Y_RNA.515-201ENST00000384535 112 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 Y_RNA.539-201ENST00000384635 107 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CLRN1P58418 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.96□□□□□ -1.94
CLRN1P58418 CST9LP2-201ENST00000437612 320 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.96□□□□□ -1.94
CLRN1P58418 SNORA84-201ENST00000459229 133 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 RPL21P10-201ENST00000463521 490 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC117440.1-201ENST00000474107 571 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC091179.3-201ENST00000474761 144 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC021205.2-201ENST00000480069 347 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC145146.1-201ENST00000496370 254 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 SEPT14P8-201ENST00000508026 178 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.96□□□□□ -1.94
CLRN1P58418 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.96□□□□□ -1.94
CLRN1P58418 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.96□□□□□ -1.94
CLRN1P58418 AK6P2-201ENST00000549020 471 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.96□□□□□ -1.94
CLRN1P58418 MIR4276-201ENST00000584832 70 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.96□□□□□ -1.94
CLRN1P58418 SNORA51-201ENST00000606420 132 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC011373.1-201ENST00000607270 237 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 uc_338.1-201ENST00000612113 180 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC018692.3-201ENST00000623929 123 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 AC110079.1-202ENST00000635213 138 ntBASIC2.96□□□□□ -1.94
CLRN1P58418 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.96□□□□□ -1.94
CLRN1P58418 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN1P58418 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN1P58418 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
CLRN1P58418 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN1P58418 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN1P58418 RNU6-338P-201ENST00000383888 105 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 RNU6-21P-201ENST00000384710 107 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 Y_RNA.570-201ENST00000384750 101 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AL512633.1-201ENST00000399931 655 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 MIR320B2-201ENST00000408479 138 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AC097463.2-201ENST00000421074 142 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 UQCRBP2-201ENST00000447827 297 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AC007395.1-201ENST00000451333 677 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 CYCSP35-201ENST00000451978 304 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 RPS3P1-201ENST00000456781 192 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AC093663.1-201ENST00000497190 394 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.95□□□□□ -1.94
CLRN1P58418 EIF4A1P12-201ENST00000551910 141 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.95□□□□□ -1.94
CLRN1P58418 SNRPGP20-201ENST00000604477 205 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 UCA1.1-201ENST00000620952 75 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
CLRN1P58418 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLRN1P58418 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN1P58418 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN1P58418 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLRN1P58418 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLRN1P58418 snoU2_19.1-201ENST00000362361 80 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 RNU6-727P-201ENST00000363592 107 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 Y_RNA.230-201ENST00000364348 109 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 Y_RNA.277-201ENST00000364754 102 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 RNU6-1175P-201ENST00000365200 107 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 SNORA48.8-201ENST00000391324 134 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.94□□□□□ -1.94
CLRN1P58418 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.94□□□□□ -1.94
CLRN1P58418 AL139109.1-201ENST00000455491 297 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 SERF1AP1-201ENST00000514575 187 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 CYCSP23-201ENST00000519781 313 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.94□□□□□ -1.94
CLRN1P58418 AC233702.2-202ENST00000562547 291 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 AC005176.2-201ENST00000596933 147 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 AC008739.3-201ENST00000603262 127 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 MIR92B-201ENST00000607575 96 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 AC127459.3-201ENST00000624328 466 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CLRN1P58418 AL359854.1-201ENST00000614203 1594 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 AL356274.2-201ENST00000624379 3752 ntBASIC2.94□□□□□ -1.94
CLRN1P58418 AC099654.7-201ENST00000635788 2127 ntBASIC2.93□□□□□ -1.94
CLRN1P58418 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLRN1P58418 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.93□□□□□ -1.94
CLRN1P58418 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms