Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC023442.1-201ENST00000531247 422 ntBASIC2.52□□□□□ -2.01
CDH12P55289 MIR3136-201ENST00000583498 78 ntBASIC2.52□□□□□ -2.01
CDH12P55289 AC104695.3-201ENST00000604052 296 ntBASIC2.52□□□□□ -2.01
CDH12P55289 AL034555.1-201ENST00000604816 211 ntBASIC2.52□□□□□ -2.01
CDH12P55289 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CDH12P55289 AC005592.1-201ENST00000566527 1640 ntBASIC2.52□□□□□ -2.01
CDH12P55289 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CDH12P55289 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CDH12P55289 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH12P55289 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH12P55289 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDH12P55289 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH12P55289 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CDH12P55289 RNU6-222P-201ENST00000362438 107 ntBASIC2.51□□□□□ -2.01
CDH12P55289 RNU6-1210P-201ENST00000363775 107 ntBASIC2.51□□□□□ -2.01
CDH12P55289 Y_RNA.358-201ENST00000365491 99 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC117470.1-201ENST00000381974 330 ntBASIC2.51□□□□□ -2.01
CDH12P55289 SNORA69.1-201ENST00000390904 137 ntBASIC2.51□□□□□ -2.01
CDH12P55289 Y_RNA.605-201ENST00000410577 105 ntBASIC2.51□□□□□ -2.01
CDH12P55289 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.51□□□□□ -2.01
CDH12P55289 OR2AQ1P-201ENST00000451972 200 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC112492.4-201ENST00000456549 352 ntBASIC2.51□□□□□ -2.01
CDH12P55289 RPL22P13-201ENST00000493291 347 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH12P55289 RNA5SP112-201ENST00000515937 99 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC144568.1-201ENST00000520139 137 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.51□□□□□ -2.01
CDH12P55289 GNAI2P1-201ENST00000541815 315 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC022080.3-201ENST00000544433 482 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH12P55289 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.51□□□□□ -2.01
CDH12P55289 AC006600.1-201ENST00000572529 153 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC103810.1-201ENST00000579873 453 ntBASIC2.51□□□□□ -2.01
CDH12P55289 MIR5188-201ENST00000583467 113 ntBASIC2.51□□□□□ -2.01
CDH12P55289 AC010620.2-201ENST00000600135 313 ntBASIC2.51□□□□□ -2.01
CDH12P55289 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
CDH12P55289 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.51□□□□□ -2.01
CDH12P55289 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH12P55289 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH12P55289 OR56A5-201ENST00000340110 738 ntBASIC2.5□□□□□ -2.01
CDH12P55289 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH12P55289 RNU4-15P-201ENST00000362613 141 ntBASIC2.5□□□□□ -2.01
CDH12P55289 RNU1-72P-201ENST00000362976 153 ntBASIC2.5□□□□□ -2.01
CDH12P55289 SNORA18.3-201ENST00000384122 132 ntBASIC2.5□□□□□ -2.01
CDH12P55289 Y_RNA.527-201ENST00000384573 102 ntBASIC2.5□□□□□ -2.01
CDH12P55289 MIR153-2-201ENST00000385225 87 ntBASIC2.5□□□□□ -2.01
CDH12P55289 UBA52P6-201ENST00000399822 382 ntBASIC2.5□□□□□ -2.01
CDH12P55289 CBX3P9-201ENST00000402326 552 ntBASIC2.5□□□□□ -2.01
CDH12P55289 RPL19P1-201ENST00000411635 428 ntBASIC2.5□□□□□ -2.01
CDH12P55289 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH12P55289 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH12P55289 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.5□□□□□ -2.01
CDH12P55289 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH12P55289 RNU7-87P-201ENST00000459343 62 ntBASIC2.5□□□□□ -2.01
CDH12P55289 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH12P55289 RNU6-475P-201ENST00000516073 104 ntBASIC2.5□□□□□ -2.01
CDH12P55289 AC027288.2-201ENST00000553028 243 ntBASIC2.5□□□□□ -2.01
CDH12P55289 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.5□□□□□ -2.01
CDH12P55289 MIR4325-201ENST00000583049 90 ntBASIC2.5□□□□□ -2.01
CDH12P55289 MIR5195-201ENST00000583555 115 ntBASIC2.5□□□□□ -2.01
CDH12P55289 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.5□□□□□ -2.01
CDH12P55289 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH12P55289 AL132822.1-201ENST00000617063 513 ntBASIC2.5□□□□□ -2.01
CDH12P55289 AL162373.1-201ENST00000620433 407 ntBASIC2.5□□□□□ -2.01
CDH12P55289 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CDH12P55289 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.5□□□□□ -2.01
CDH12P55289 MTND5P16-201ENST00000460269 1703 ntBASIC2.5□□□□□ -2.01
CDH12P55289 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDH12P55289 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CDH12P55289 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CDH12P55289 RNU6-486P-201ENST00000363116 107 ntBASIC2.49□□□□□ -2.01
CDH12P55289 SNORD46.1-201ENST00000364139 104 ntBASIC2.49□□□□□ -2.01
CDH12P55289 Y_RNA.557-201ENST00000384680 107 ntBASIC2.49□□□□□ -2.01
CDH12P55289 RNA5SP210-201ENST00000391034 120 ntBASIC2.49□□□□□ -2.01
CDH12P55289 RPS26P42-201ENST00000413485 326 ntBASIC2.49□□□□□ -2.01
CDH12P55289 RPL30P4-201ENST00000429309 333 ntBASIC2.49□□□□□ -2.01
CDH12P55289 MICF-203ENST00000432679 129 ntBASIC2.49□□□□□ -2.01
CDH12P55289 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH12P55289 AP000870.1-201ENST00000472927 406 ntBASIC2.49□□□□□ -2.01
CDH12P55289 HMGN1P10-201ENST00000474557 553 ntBASIC2.49□□□□□ -2.01
CDH12P55289 ANXA2P1-201ENST00000505539 926 ntBASIC2.49□□□□□ -2.01
CDH12P55289 RNU6-567P-201ENST00000516746 107 ntBASIC2.49□□□□□ -2.01
CDH12P55289 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH12P55289 AC004486.1-201ENST00000546846 233 ntBASIC2.49□□□□□ -2.01
CDH12P55289 HSBP1P1-201ENST00000555205 166 ntBASIC2.49□□□□□ -2.01
CDH12P55289 CYP4A27P-201ENST00000567218 190 ntBASIC2.49□□□□□ -2.01
CDH12P55289 VN1R91P-201ENST00000594377 169 ntBASIC2.49□□□□□ -2.01
CDH12P55289 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.49□□□□□ -2.01
CDH12P55289 U2.1-201ENST00000618978 145 ntBASIC2.49□□□□□ -2.01
CDH12P55289 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH12P55289 AC073346.2-201ENST00000624724 2058 ntBASIC2.49□□□□□ -2.01
CDH12P55289 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH12P55289 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH12P55289 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH12P55289 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CDH12P55289 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH12P55289 snoU2_19.1-201ENST00000362361 80 ntBASIC2.48□□□□□ -2.01
CDH12P55289 Y_RNA.145-201ENST00000363527 102 ntBASIC2.48□□□□□ -2.01
CDH12P55289 RNU6-450P-201ENST00000364654 107 ntBASIC2.48□□□□□ -2.01
CDH12P55289 RNU1-109P-201ENST00000383960 147 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms