Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 Y_RNA.711-201ENST00000516993 102 ntBASIC1.99□□□□□ -2.09
ATRXP46100 Y_RNA.715-201ENST00000517082 110 ntBASIC1.99□□□□□ -2.09
ATRXP46100 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.99□□□□□ -2.09
ATRXP46100 AC020661.2-201ENST00000560114 134 ntBASIC1.99□□□□□ -2.09
ATRXP46100 MIR4782-201ENST00000577987 79 ntBASIC1.99□□□□□ -2.09
ATRXP46100 MTND4LP5-201ENST00000605152 292 ntBASIC1.99□□□□□ -2.09
ATRXP46100 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ATRXP46100 SCARNA4-202ENST00000625402 129 ntBASIC1.99□□□□□ -2.09
ATRXP46100 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
ATRXP46100 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
ATRXP46100 AC005592.1-201ENST00000566527 1640 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNU6-639P-201ENST00000384074 107 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNU6-1105P-201ENST00000384774 107 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RPL21P66-201ENST00000426566 466 ntBASIC1.98□□□□□ -2.09
ATRXP46100 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.98□□□□□ -2.09
ATRXP46100 DYNLT3P2-201ENST00000442517 295 ntBASIC1.98□□□□□ -2.09
ATRXP46100 MTND3P25-201ENST00000509243 135 ntBASIC1.98□□□□□ -2.09
ATRXP46100 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.98□□□□□ -2.09
ATRXP46100 SCARNA24.2-201ENST00000516968 130 ntBASIC1.98□□□□□ -2.09
ATRXP46100 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.98□□□□□ -2.09
ATRXP46100 AC022634.1-201ENST00000520765 532 ntBASIC1.98□□□□□ -2.09
ATRXP46100 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.98□□□□□ -2.09
ATRXP46100 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.98□□□□□ -2.09
ATRXP46100 MIR3941-201ENST00000582572 103 ntBASIC1.98□□□□□ -2.09
ATRXP46100 AL158032.1-201ENST00000605401 106 ntBASIC1.98□□□□□ -2.09
ATRXP46100 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ATRXP46100 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ATRXP46100 RNU4-41P-201ENST00000364426 143 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNU4-42P-201ENST00000364738 142 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNU6-1286P-201ENST00000383871 107 ntBASIC1.98□□□□□ -2.09
ATRXP46100 Y_RNA.463-201ENST00000384271 102 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNY1P4-201ENST00000384595 115 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNU2-71P-201ENST00000411395 189 ntBASIC1.98□□□□□ -2.09
ATRXP46100 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.98□□□□□ -2.09
ATRXP46100 RPS27AP10-201ENST00000496103 208 ntBASIC1.98□□□□□ -2.09
ATRXP46100 AC097473.1-201ENST00000508142 408 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNU6-123P-201ENST00000516163 102 ntBASIC1.98□□□□□ -2.09
ATRXP46100 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.98□□□□□ -2.09
ATRXP46100 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.98□□□□□ -2.09
ATRXP46100 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.98□□□□□ -2.09
ATRXP46100 AP002826.1-201ENST00000608835 315 ntBASIC1.98□□□□□ -2.09
ATRXP46100 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.98□□□□□ -2.09
ATRXP46100 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.98□□□□□ -2.09
ATRXP46100 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATRXP46100 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.123-201ENST00000363338 102 ntBASIC1.97□□□□□ -2.09
ATRXP46100 SNORD116-20-201ENST00000384529 92 ntBASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.530-201ENST00000384587 101 ntBASIC1.97□□□□□ -2.09
ATRXP46100 MT-TG-201ENST00000387429 68 ntBASIC1.97□□□□□ -2.09
ATRXP46100 RNA5SP239-201ENST00000410218 129 ntBASIC1.97□□□□□ -2.09
ATRXP46100 RNU2-33P-201ENST00000410344 192 ntBASIC1.97□□□□□ -2.09
ATRXP46100 RNU6-1025P-201ENST00000410629 104 ntBASIC1.97□□□□□ -2.09
ATRXP46100 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.97□□□□□ -2.09
ATRXP46100 AC007547.1-201ENST00000462177 490 ntBASIC1.97□□□□□ -2.09
ATRXP46100 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.97□□□□□ -2.09
ATRXP46100 AC022616.4-201ENST00000522985 181 ntBASIC1.97□□□□□ -2.09
ATRXP46100 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.97□□□□□ -2.09
ATRXP46100 AL391261.3-201ENST00000557194 520 ntBASIC1.97□□□□□ -2.09
ATRXP46100 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.97□□□□□ -2.09
ATRXP46100 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.97□□□□□ -2.09
ATRXP46100 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.97□□□□□ -2.09
ATRXP46100 AC096772.1-201ENST00000609146 564 ntBASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.812-201ENST00000610788 101 ntBASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.784-201ENST00000613803 101 ntBASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.787-201ENST00000616522 101 ntBASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.780-201ENST00000617336 101 ntBASIC1.97□□□□□ -2.09
ATRXP46100 AC002076.2-201ENST00000617362 122 ntBASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.801-201ENST00000619005 101 ntBASIC1.97□□□□□ -2.09
ATRXP46100 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATRXP46100 AC093831.2-201ENST00000624393 3427 ntBASIC1.97□□□□□ -2.09
ATRXP46100 AC016717.2-201ENST00000609089 5141 ntBASIC1.97□□□□□ -2.09
ATRXP46100 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATRXP46100 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATRXP46100 SET-203ENST00000372688 801 ntTSL 2 BASIC1.97□□□□□ -2.09
ATRXP46100 RPL23AP48-201ENST00000406913 488 ntBASIC1.97□□□□□ -2.09
ATRXP46100 U3.37-201ENST00000408528 213 ntBASIC1.97□□□□□ -2.09
ATRXP46100 MIR548J-201ENST00000408833 112 ntBASIC1.97□□□□□ -2.09
ATRXP46100 RNU2-37P-201ENST00000410695 177 ntBASIC1.97□□□□□ -2.09
ATRXP46100 RNU4-14P-201ENST00000410858 122 ntBASIC1.97□□□□□ -2.09
ATRXP46100 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.97□□□□□ -2.09
ATRXP46100 BPY2DP-201ENST00000422208 265 ntBASIC1.97□□□□□ -2.09
ATRXP46100 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.97□□□□□ -2.09
ATRXP46100 RNU6-1037P-201ENST00000459571 107 ntBASIC1.97□□□□□ -2.09
ATRXP46100 Y_RNA.687-201ENST00000516558 91 ntBASIC1.97□□□□□ -2.09
ATRXP46100 RPPH1-2P-201ENST00000516688 293 ntBASIC1.97□□□□□ -2.09
ATRXP46100 RNU6-256P-201ENST00000516747 97 ntBASIC1.97□□□□□ -2.09
ATRXP46100 CASP1P1-201ENST00000526345 212 ntBASIC1.97□□□□□ -2.09
ATRXP46100 MIR151B-201ENST00000584249 96 ntBASIC1.97□□□□□ -2.09
ATRXP46100 AC087588.2-201ENST00000617667 426 ntBASIC1.97□□□□□ -2.09
ATRXP46100 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ATRXP46100 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-593P-201ENST00000364716 112 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RNU6-1040P-201ENST00000383974 107 ntBASIC1.96□□□□□ -2.1
ATRXP46100 MIR517A-201ENST00000385001 87 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RN7SKP158-201ENST00000410453 326 ntBASIC1.96□□□□□ -2.1
ATRXP46100 RAC1P3-201ENST00000416129 580 ntBASIC1.96□□□□□ -2.1
ATRXP46100 AL445646.1-201ENST00000431784 216 ntBASIC1.96□□□□□ -2.1
ATRXP46100 FABP5P15-201ENST00000453566 214 ntBASIC1.96□□□□□ -2.1
ATRXP46100 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.96□□□□□ -2.1
ATRXP46100 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms