Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC090617.3-201ENST00000573670 475 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.67□□□□□ -1.98
TNFSF4P23510 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFSF4P23510 SNRPGP17-201ENST00000603780 214 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFSF4P23510 AC135507.2-201ENST00000612443 309 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 MIR1244-1-201ENST00000612829 85 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 MIR1244-3-201ENST00000635744 85 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 MIR1244-2-201ENST00000636449 85 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 MIR1244-4-202ENST00000636813 85 ntBASIC2.67□□□□□ -1.98
TNFSF4P23510 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFSF4P23510 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AC006026.1-201ENST00000444025 1803 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 RNU6-1115P-201ENST00000362490 106 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 RNA5SP387-201ENST00000364226 106 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 SNORA70.4-201ENST00000365509 134 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 Y_RNA.419-201ENST00000384041 102 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 Y_RNA.428-201ENST00000384078 102 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 SNORA7.4-201ENST00000384249 137 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 Y_RNA.463-201ENST00000384271 102 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 RNU1-148P-201ENST00000384472 162 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 RN7SKP58-201ENST00000411010 305 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFSF4P23510 AC004386.2-201ENST00000441858 148 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 UBE2V1P7-201ENST00000446395 340 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AC009237.7-201ENST00000447357 229 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFSF4P23510 RNU7-87P-201ENST00000459343 62 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 RN7SL504P-201ENST00000494496 287 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFSF4P23510 SNORA4.4-201ENST00000515921 135 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 RNU6-1098P-201ENST00000516772 96 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AC144568.1-201ENST00000520139 137 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AC104027.1-201ENST00000521887 300 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AP002404.1-201ENST00000532005 451 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFSF4P23510 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFSF4P23510 MIR3126-201ENST00000577443 74 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AC026271.5-201ENST00000577873 130 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 MIR5006-201ENST00000583027 110 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFSF4P23510 AC090971.5-201ENST00000621102 293 ntBASIC2.66□□□□□ -1.98
TNFSF4P23510 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TNFSF4P23510 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
TNFSF4P23510 MTND5P16-201ENST00000460269 1703 ntBASIC2.65□□□□□ -1.98
TNFSF4P23510 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
TNFSF4P23510 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFSF4P23510 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFSF4P23510 MIR208A-201ENST00000362287 71 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 Y_RNA.197-201ENST00000364004 102 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 RNU1-91P-201ENST00000364746 163 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 RNA5SP274-201ENST00000410484 108 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 SRIP3-201ENST00000413200 219 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFSF4P23510 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFSF4P23510 RNU6-699P-201ENST00000517081 110 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 RNA5SP490-201ENST00000517141 136 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 DEFB131C-201ENST00000528817 165 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFSF4P23510 AC107016.2-201ENST00000547968 190 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 YPEL5P2-201ENST00000605553 359 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 AL080274.1-201ENST00000605565 220 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFSF4P23510 MIR3651-201ENST00000630427 90 ntBASIC2.65□□□□□ -1.99
TNFSF4P23510 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.65□□□□□ -1.99
TNFSF4P23510 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFSF4P23510 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFSF4P23510 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFSF4P23510 RNU6-874P-201ENST00000362390 105 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 RNU6-873P-201ENST00000363833 107 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 RNU6-743P-201ENST00000364151 106 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 RNU6-1026P-201ENST00000384465 108 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 MIR491-201ENST00000384877 84 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 MIR10B-201ENST00000385011 110 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFSF4P23510 MTCO3P8-201ENST00000453691 755 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFSF4P23510 RNU7-14P-201ENST00000459331 62 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFSF4P23510 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFSF4P23510 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFSF4P23510 SNORA25.14-201ENST00000516481 132 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 RNU6-344P-201ENST00000516635 111 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 SNORD116.3-201ENST00000517176 78 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 MIR2355-201ENST00000517199 87 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 RN7SKP57-201ENST00000517248 293 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 ANP32BP3-201ENST00000559213 706 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.64□□□□□ -1.99
TNFSF4P23510 AL162274.2-201ENST00000614406 332 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 AL359314.1-201ENST00000616913 261 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 AC243829.7-201ENST00000633081 225 ntBASIC2.64□□□□□ -1.99
TNFSF4P23510 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFSF4P23510 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
TNFSF4P23510 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFSF4P23510 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TNFSF4P23510 MIR422A-201ENST00000362286 90 ntBASIC2.63□□□□□ -1.99
TNFSF4P23510 RNU6-222P-201ENST00000362438 107 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms