Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
XRCC1P18887 AL645568.3-201ENST00000433683 316 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 MTND3P21-201ENST00000433774 331 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.71□□□□□ -2.14
XRCC1P18887 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.71□□□□□ -2.14
XRCC1P18887 AC114801.2-201ENST00000503825 781 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.71□□□□□ -2.14
XRCC1P18887 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.71□□□□□ -2.14
XRCC1P18887 SNORA19.2-201ENST00000516013 114 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 SNORA25.15-201ENST00000516487 89 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 RNU6-323P-201ENST00000521915 107 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.71□□□□□ -2.14
XRCC1P18887 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.71□□□□□ -2.14
XRCC1P18887 CYP4A27P-201ENST00000567218 190 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AC010928.2-201ENST00000588017 287 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AC080013.6-201ENST00000606185 215 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AL022345.1-201ENST00000607292 135 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AL357078.3-201ENST00000607528 618 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 AC092807.2-201ENST00000609367 243 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.71□□□□□ -2.14
XRCC1P18887 PCGEM1.1-201ENST00000613431 131 ntBASIC1.71□□□□□ -2.14
XRCC1P18887 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
XRCC1P18887 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.71□□□□□ -2.14
XRCC1P18887 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
XRCC1P18887 RNU6-227P-201ENST00000362865 103 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 RNU4-20P-201ENST00000365601 151 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 RNU6-1329P-201ENST00000365664 107 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 SNORD73A-201ENST00000386062 65 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 RNU11-3P-201ENST00000391111 133 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 RNA5SP212-201ENST00000391223 107 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.7□□□□□ -2.14
XRCC1P18887 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.7□□□□□ -2.14
XRCC1P18887 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.7□□□□□ -2.14
XRCC1P18887 AL359672.1-201ENST00000442302 409 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.7□□□□□ -2.14
XRCC1P18887 U8.21-201ENST00000459536 136 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC019235.1-201ENST00000503847 207 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC005741.1-201ENST00000511094 432 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.7□□□□□ -2.14
XRCC1P18887 RNU6-1038P-201ENST00000516516 104 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 RNU6-612P-201ENST00000516909 102 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.7□□□□□ -2.14
XRCC1P18887 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.7□□□□□ -2.14
XRCC1P18887 AP005597.4-201ENST00000526762 229 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 EIF4A1P12-201ENST00000551910 141 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AL118558.2-201ENST00000556294 238 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.7□□□□□ -2.14
XRCC1P18887 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.7□□□□□ -2.14
XRCC1P18887 AC243960.4-201ENST00000600532 288 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC078795.3-201ENST00000602913 472 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AL162413.1-201ENST00000603198 110 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 CYP2C61P-201ENST00000604072 290 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC064807.4-201ENST00000607201 407 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC005520.5-201ENST00000613926 164 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AL773524.1-201ENST00000614065 229 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 AC068137.3-201ENST00000639191 341 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
XRCC1P18887 MTND4P23-201ENST00000447723 1363 ntBASIC1.7□□□□□ -2.14
XRCC1P18887 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
XRCC1P18887 RNA5SP99-201ENST00000364020 114 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 Y_RNA.231-201ENST00000364358 102 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 RNU6-214P-201ENST00000384130 107 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
XRCC1P18887 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
XRCC1P18887 AL627390.1-201ENST00000396055 340 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AL033519.2-201ENST00000403958 392 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 BX510359.4-201ENST00000423750 193 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.69□□□□□ -2.14
XRCC1P18887 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.69□□□□□ -2.14
XRCC1P18887 HMGN2P18-201ENST00000450680 270 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 RNU6-991P-201ENST00000516168 107 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 RNU6-1281P-201ENST00000516223 105 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 HMGB1P33-201ENST00000563485 527 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AC109446.1-201ENST00000566172 220 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AC100830.2-201ENST00000581636 240 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 MIR5692C1-201ENST00000585309 91 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AL078605.1-201ENST00000603529 500 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 Z98751.3-201ENST00000604447 521 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AC004492.1-201ENST00000607036 742 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AC097065.2-201ENST00000608159 533 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AC103591.3-201ENST00000608684 209 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 DISC2.1-201ENST00000612827 205 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AL450472.1-202ENST00000637286 180 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.69□□□□□ -2.14
XRCC1P18887 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.69□□□□□ -2.14
XRCC1P18887 AC009541.1-201ENST00000438279 2662 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 RNA5SP276-201ENST00000362580 94 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
XRCC1P18887 RNU6-160P-201ENST00000384591 107 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 SNORA12-201ENST00000391162 147 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 AL356432.1-201ENST00000405809 419 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 AL358453.1-201ENST00000422522 250 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 EIF4EP2-201ENST00000422816 654 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 AC012306.1-201ENST00000423267 114 ntBASIC1.68□□□□□ -2.14
XRCC1P18887 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.68□□□□□ -2.14
XRCC1P18887 UBE2V1P4-201ENST00000425374 344 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms