Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-525P-201ENST00000363685 104 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 RNU6-961P-201ENST00000363893 105 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 RNU6-20P-201ENST00000384106 107 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 MIR7-3-201ENST00000384898 110 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 AC138623.1-201ENST00000418060 216 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 DBIP2-201ENST00000419076 262 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.38□□□□□ -1.87
COL6A2P12110 AC117440.1-201ENST00000474107 571 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 AC068657.1-201ENST00000520807 306 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 AC104027.1-201ENST00000521887 300 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 uc_338.14-201ENST00000613162 166 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 U2.14-201ENST00000615943 113 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 AC039056.2-201ENST00000622261 511 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 CR392039.5-201ENST00000623201 510 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
COL6A2P12110 AL109809.4-201ENST00000603520 2185 ntBASIC3.38□□□□□ -1.87
COL6A2P12110 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
COL6A2P12110 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL6A2P12110 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL6A2P12110 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL6A2P12110 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.37□□□□□ -1.87
COL6A2P12110 RNU6-799P-201ENST00000363567 107 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 Y_RNA.277-201ENST00000364754 102 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 MIR147B-201ENST00000390185 80 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 SNORA53-201ENST00000391141 249 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.37□□□□□ -1.87
COL6A2P12110 AL445305.1-201ENST00000432577 575 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.37□□□□□ -1.87
COL6A2P12110 RN7SKP18-201ENST00000516005 275 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 SNORA25.14-201ENST00000516481 132 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 Y_RNA.683-201ENST00000516508 93 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 SCARNA24.2-201ENST00000516968 130 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.37□□□□□ -1.87
COL6A2P12110 AL034555.1-201ENST00000604816 211 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AC098479.1-201ENST00000609225 154 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AC069200.1-201ENST00000609511 323 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.37□□□□□ -1.87
COL6A2P12110 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL6A2P12110 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
COL6A2P12110 ZNF204P-201ENST00000416749 2397 ntBASIC3.37□□□□□ -1.87
COL6A2P12110 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL6A2P12110 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL6A2P12110 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
COL6A2P12110 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.36□□□□□ -1.87
COL6A2P12110 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
COL6A2P12110 RNU1-62P-201ENST00000362599 164 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 Y_RNA.40-201ENST00000362645 93 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 Y_RNA.179-201ENST00000363844 90 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 Y_RNA.286-201ENST00000364813 102 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 RNU4-70P-201ENST00000384579 139 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 MIR449B-201ENST00000384995 97 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
COL6A2P12110 CBX3P9-201ENST00000402326 552 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 AL133475.1-201ENST00000404414 305 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 RNA5SP201-201ENST00000410316 124 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 AL139156.1-201ENST00000412785 841 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.36□□□□□ -1.87
COL6A2P12110 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL6A2P12110 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.36□□□□□ -1.87
COL6A2P12110 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.36□□□□□ -1.87
COL6A2P12110 AL133547.1-201ENST00000448546 220 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 AL139109.1-201ENST00000455491 297 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 AC091179.1-201ENST00000461606 579 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 AC093663.1-201ENST00000497190 394 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 GZMAP1-201ENST00000503054 631 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 SNORA64.4-201ENST00000516632 81 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 RNU2-31P-201ENST00000516954 155 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.36□□□□□ -1.87
COL6A2P12110 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.36□□□□□ -1.87
COL6A2P12110 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.36□□□□□ -1.87
COL6A2P12110 AL357075.2-201ENST00000614906 189 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
COL6A2P12110 MTND5P35-201ENST00000557537 1720 ntBASIC3.36□□□□□ -1.87
COL6A2P12110 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
COL6A2P12110 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
COL6A2P12110 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.35□□□□□ -1.87
COL6A2P12110 MIR148B-201ENST00000362252 99 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 Y_RNA.54-201ENST00000362766 105 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 RNU6-793P-201ENST00000384233 104 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 MIR208B-201ENST00000401172 77 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 MIR320B2-201ENST00000408479 138 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.35□□□□□ -1.87
COL6A2P12110 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.35□□□□□ -1.87
COL6A2P12110 AC006445.1-201ENST00000491925 405 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.35□□□□□ -1.87
COL6A2P12110 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.35□□□□□ -1.87
COL6A2P12110 RNU7-110P-201ENST00000516891 62 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.35□□□□□ -1.87
COL6A2P12110 AC130289.1-201ENST00000577321 73 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.35□□□□□ -1.87
COL6A2P12110 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.35□□□□□ -1.87
COL6A2P12110 SNRPGP20-201ENST00000604477 205 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 AL137843.1-201ENST00000605078 385 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 PCGEM1.1-201ENST00000613431 131 ntBASIC3.35□□□□□ -1.87
COL6A2P12110 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms