Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 U6.99-201ENST00000637524 83 ntBASIC1.85□□□□□ -2.11
HOXC4P09017 AC099654.10-201ENST00000640395 161 ntBASIC1.85□□□□□ -2.11
HOXC4P09017 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC4P09017 CDC27P3-201ENST00000635418 1910 ntBASIC1.85□□□□□ -2.11
HOXC4P09017 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC4P09017 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC4P09017 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HOXC4P09017 SNORD14B-201ENST00000364533 90 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 RNU6-395P-201ENST00000365662 106 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HOXC4P09017 Z98749.2-208ENST00000381646 500 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 RNU6-1013P-201ENST00000384180 107 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 Y_RNA.473-201ENST00000384333 102 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 SNORD116-29-201ENST00000384516 83 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 SNORA40C-201ENST00000391285 128 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 EIF1AXP1-201ENST00000419267 435 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC4P09017 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC4P09017 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC4P09017 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC4P09017 FTH1P25-201ENST00000447665 469 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC4P09017 HMGN2P23-201ENST00000456759 269 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 snoU109.2-201ENST00000459316 135 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AC011005.2-201ENST00000487324 359 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AC068781.1-201ENST00000488231 618 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 RNU6-548P-201ENST00000517083 115 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AC104576.1-201ENST00000524225 88 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 CYCSP27-201ENST00000527643 293 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC4P09017 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC4P09017 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC4P09017 FRG2DP-202ENST00000566967 323 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 MIR4782-201ENST00000577987 79 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 MIR4255-201ENST00000579351 72 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 ELOCP5-201ENST00000604924 333 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AL353621.2-201ENST00000605340 133 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 RNU6-85P-201ENST00000605989 107 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AL133255.1-201ENST00000606374 441 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AL022345.1-201ENST00000607292 135 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 AC064836.2-201ENST00000609491 462 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC4P09017 RMST_4.1-201ENST00000616886 107 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 MIR6134-201ENST00000617606 109 ntBASIC1.84□□□□□ -2.11
HOXC4P09017 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.84□□□□□ -2.11
HOXC4P09017 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
HOXC4P09017 Z75746.1-201ENST00000440243 2080 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 Y_RNA.11-201ENST00000362375 109 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNA5SP432-201ENST00000362480 116 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-37P-201ENST00000362692 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-11P-201ENST00000364234 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-25P-201ENST00000383873 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-1-201ENST00000383898 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-48P-201ENST00000384161 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-36P-201ENST00000384172 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-4P-201ENST00000384205 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-5P-201ENST00000384238 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-3P-201ENST00000384314 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-16P-201ENST00000384385 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU1-148P-201ENST00000384472 162 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-15P-201ENST00000384534 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-2-201ENST00000384627 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-29P-201ENST00000384637 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-95P-201ENST00000384697 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-9-201ENST00000384776 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-33P-201ENST00000384793 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 MIR10A-201ENST00000385043 110 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 Y_RNA.623-201ENST00000411128 95 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 AC016831.2-201ENST00000417179 352 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 AC004383.1-201ENST00000438135 289 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXC4P09017 MTND1P17-201ENST00000448961 204 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU7-193P-201ENST00000516723 65 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNA5SP364-201ENST00000516938 78 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.83□□□□□ -2.12
HOXC4P09017 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC4P09017 SNRPGP19-201ENST00000603826 189 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 AC113139.1-201ENST00000605049 239 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 AL138963.2-201ENST00000605137 226 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 RNU6-6P-201ENST00000606623 107 ntBASIC1.83□□□□□ -2.12
HOXC4P09017 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HOXC4P09017 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC4P09017 MIR412-201ENST00000362142 91 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 RNU6-562P-201ENST00000362731 107 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 RNA5SP240-201ENST00000365355 128 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 Y_RNA.480-201ENST00000384364 102 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 RNU6-306P-201ENST00000384617 107 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 RNU6-482P-201ENST00000391068 107 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.82□□□□□ -2.12
HOXC4P09017 AC074085.1-201ENST00000413598 418 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 AC097463.2-201ENST00000421074 142 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC4P09017 AL359672.1-201ENST00000442302 409 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.82□□□□□ -2.12
HOXC4P09017 RNU7-187P-201ENST00000458985 68 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 RPL36AP48-201ENST00000485521 314 ntBASIC1.82□□□□□ -2.12
HOXC4P09017 MTCO1P29-201ENST00000496868 288 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms