Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC104458.1-201ENST00000608243 463 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 AC068137.3-201ENST00000639191 341 ntBASIC1.52□□□□□ -2.17
CTDNEP1O95476 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.52□□□□□ -2.17
CTDNEP1O95476 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU1-62P-201ENST00000362599 164 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU6-655P-201ENST00000362858 107 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU6-1210P-201ENST00000363775 107 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU6-82P-201ENST00000363970 107 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU6-944P-201ENST00000364023 107 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 SNORD32A-201ENST00000364805 84 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 CBX3P9-201ENST00000402326 552 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AL590002.1-201ENST00000406554 418 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU2-48P-201ENST00000410694 191 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 SNAP23P1-201ENST00000433229 246 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC012308.1-201ENST00000451232 178 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU7-95P-201ENST00000459222 64 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 RNU6-1208P-201ENST00000459588 107 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 RPL30P1-201ENST00000488676 339 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC091874.1-201ENST00000511402 339 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC109479.2-201ENST00000517842 174 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 CYCSP27-201ENST00000527643 293 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 NDUFA5P6-201ENST00000542110 379 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 IMMP1LP2-201ENST00000552954 492 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 MIR5692C1-201ENST00000585309 91 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC091135.1-201ENST00000585943 307 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC107304.1-201ENST00000604229 296 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 AC064836.2-201ENST00000609491 462 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 FAM157A-202ENST00000615155 405 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 FER-210ENST00000628534 558 ntTSL 5 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 MIR1321-201ENST00000637766 79 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.51□□□□□ -2.17
CTDNEP1O95476 OR4G1P-203ENST00000641984 1631 ntBASIC1.51□□□□□ -2.17
CTDNEP1O95476 snoU2_19.1-201ENST00000362361 80 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 Y_RNA.231-201ENST00000364358 102 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 Y_RNA.256-201ENST00000364594 104 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 RNU6-43P-201ENST00000384302 107 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 SNORA8-201ENST00000384574 139 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 RNA5SP212-201ENST00000391223 107 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 Y_RNA.615-201ENST00000410769 117 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 MTCO1P21-201ENST00000416634 589 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 MTCO1P20-201ENST00000425366 358 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.5□□□□□ -2.17
CTDNEP1O95476 MRPS10P2-201ENST00000431226 381 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.5□□□□□ -2.17
CTDNEP1O95476 MTND3P21-201ENST00000433774 331 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 SEPT14P3-201ENST00000439401 183 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AL732372.2-207ENST00000445840 183 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 SEPT14P2-201ENST00000453405 183 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.5□□□□□ -2.17
CTDNEP1O95476 RNU7-138P-201ENST00000459479 64 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AC027575.1-201ENST00000481064 460 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AC083904.1-201ENST00000487828 231 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 Y_RNA.654-201ENST00000497848 106 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 SEPT14P4-201ENST00000513445 186 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 RNU5F-2P-201ENST00000516066 82 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 Y_RNA.665-201ENST00000516177 98 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 FO082796.1-201ENST00000523795 183 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AC084364.2-201ENST00000546924 395 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 BNIP3P16-201ENST00000589779 534 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AL162413.1-201ENST00000603198 110 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 CTHRC1P1-201ENST00000605383 469 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AC012557.2-201ENST00000605919 418 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 Z82243.1-201ENST00000609432 473 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 RMST_3.1-201ENST00000611651 109 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AC024614.3-201ENST00000637860 256 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 AC068137.4-201ENST00000638485 296 ntBASIC1.5□□□□□ -2.17
CTDNEP1O95476 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CTDNEP1O95476 RNY3P3-201ENST00000363816 102 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 RNU6-1215P-201ENST00000384441 102 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 RNU6-1222P-201ENST00000384615 107 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 MIR181A1-201ENST00000385026 110 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 MIR548F1-201ENST00000408667 84 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 MTND2P29-201ENST00000438595 412 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 AL137159.1-201ENST00000452808 512 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 HMGN2P26-201ENST00000463169 339 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC091885.1-201ENST00000506658 268 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AK3P2-201ENST00000507976 429 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 RNU6-586P-201ENST00000517265 104 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC025423.5-201ENST00000550230 219 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AL157687.1-201ENST00000554853 619 ntBASIC1.49□□□□□ -2.17
CTDNEP1O95476 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms