Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.45□□□□□ -2.02
MBD4O95243 snoU13.26-201ENST00000459452 105 ntBASIC2.45□□□□□ -2.02
MBD4O95243 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.45□□□□□ -2.02
MBD4O95243 AC093259.1-201ENST00000509755 300 ntBASIC2.45□□□□□ -2.02
MBD4O95243 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.45□□□□□ -2.02
MBD4O95243 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.45□□□□□ -2.02
MBD4O95243 RNU6-256P-201ENST00000516747 97 ntBASIC2.45□□□□□ -2.02
MBD4O95243 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.45□□□□□ -2.02
MBD4O95243 AL138726.1-201ENST00000614873 333 ntBASIC2.45□□□□□ -2.02
MBD4O95243 MIR3662-201ENST00000637030 95 ntBASIC2.45□□□□□ -2.02
MBD4O95243 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MBD4O95243 RNU6-1159P-201ENST00000362933 107 ntBASIC2.44□□□□□ -2.02
MBD4O95243 Y_RNA.99-201ENST00000363138 105 ntBASIC2.44□□□□□ -2.02
MBD4O95243 MIR521-1-201ENST00000384902 87 ntBASIC2.44□□□□□ -2.02
MBD4O95243 MIR208B-201ENST00000401172 77 ntBASIC2.44□□□□□ -2.02
MBD4O95243 FCF1P9-201ENST00000412546 282 ntBASIC2.44□□□□□ -2.02
MBD4O95243 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD4O95243 AC027124.2-201ENST00000428249 105 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.44□□□□□ -2.02
MBD4O95243 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD4O95243 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD4O95243 UBL5P3-201ENST00000475112 231 ntBASIC2.44□□□□□ -2.02
MBD4O95243 MTCYBP18-201ENST00000501056 747 ntBASIC2.44□□□□□ -2.02
MBD4O95243 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AC005741.1-201ENST00000511094 432 ntBASIC2.44□□□□□ -2.02
MBD4O95243 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MBD4O95243 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD4O95243 AC146944.4-201ENST00000602697 718 ntBASIC2.44□□□□□ -2.02
MBD4O95243 RPL17P51-201ENST00000605218 238 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AL133215.3-201ENST00000609801 448 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AL359314.1-201ENST00000616913 261 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AC009033.1-201ENST00000624279 431 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AC090617.10-201ENST00000624308 134 ntBASIC2.44□□□□□ -2.02
MBD4O95243 AC092881.1-201ENST00000638218 2733 ntBASIC2.43□□□□□ -2.02
MBD4O95243 SNORD115-3-201ENST00000363100 82 ntBASIC2.43□□□□□ -2.02
MBD4O95243 Y_RNA.123-201ENST00000363338 102 ntBASIC2.43□□□□□ -2.02
MBD4O95243 Y_RNA.135-201ENST00000363439 95 ntBASIC2.43□□□□□ -2.02
MBD4O95243 SNORA16B-201ENST00000364674 135 ntBASIC2.43□□□□□ -2.02
MBD4O95243 RNU6-1286P-201ENST00000383871 107 ntBASIC2.43□□□□□ -2.02
MBD4O95243 RNU6-378P-201ENST00000384324 107 ntBASIC2.43□□□□□ -2.02
MBD4O95243 RNU6-192P-201ENST00000391253 100 ntBASIC2.43□□□□□ -2.02
MBD4O95243 MIR1277-201ENST00000408536 78 ntBASIC2.43□□□□□ -2.02
MBD4O95243 EIF1P1-201ENST00000421436 341 ntBASIC2.43□□□□□ -2.02
MBD4O95243 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD4O95243 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.43□□□□□ -2.02
MBD4O95243 RPS29P25-201ENST00000481709 171 ntBASIC2.43□□□□□ -2.02
MBD4O95243 AC011352.1-201ENST00000512300 793 ntBASIC2.43□□□□□ -2.02
MBD4O95243 RNU6-718P-201ENST00000516166 105 ntBASIC2.43□□□□□ -2.02
MBD4O95243 RNU6-1314P-201ENST00000517139 104 ntBASIC2.43□□□□□ -2.02
MBD4O95243 FGF7P1-201ENST00000582820 288 ntBASIC2.43□□□□□ -2.02
MBD4O95243 AC009994.1-201ENST00000606889 253 ntBASIC2.43□□□□□ -2.02
MBD4O95243 AC098679.4-201ENST00000624241 654 ntBASIC2.43□□□□□ -2.02
MBD4O95243 AC008555.8-201ENST00000623602 2168 ntBASIC2.43□□□□□ -2.02
MBD4O95243 AC027514.1-201ENST00000588561 1603 ntBASIC2.42□□□□□ -2.02
MBD4O95243 RNU6-562P-201ENST00000362731 107 ntBASIC2.42□□□□□ -2.02
MBD4O95243 RNU6-968P-201ENST00000384076 107 ntBASIC2.42□□□□□ -2.02
MBD4O95243 RNA5SP465-201ENST00000391195 109 ntBASIC2.42□□□□□ -2.02
MBD4O95243 MIR1289-2-201ENST00000408360 111 ntBASIC2.42□□□□□ -2.02
MBD4O95243 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.42□□□□□ -2.02
MBD4O95243 AL513185.2-201ENST00000425543 193 ntBASIC2.42□□□□□ -2.02
MBD4O95243 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.42□□□□□ -2.02
MBD4O95243 MIR449C-201ENST00000516047 92 ntBASIC2.42□□□□□ -2.02
MBD4O95243 RNU6-991P-201ENST00000516168 107 ntBASIC2.42□□□□□ -2.02
MBD4O95243 RNA5SP490-201ENST00000517141 136 ntBASIC2.42□□□□□ -2.02
MBD4O95243 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.42□□□□□ -2.02
MBD4O95243 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.42□□□□□ -2.02
MBD4O95243 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.42□□□□□ -2.02
MBD4O95243 AC023043.2-201ENST00000589678 1026 ntBASIC2.42□□□□□ -2.02
MBD4O95243 SNRPGP19-201ENST00000603826 189 ntBASIC2.42□□□□□ -2.02
MBD4O95243 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.42□□□□□ -2.02
MBD4O95243 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
MBD4O95243 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
MBD4O95243 RNA5SP160-201ENST00000364866 120 ntBASIC2.41□□□□□ -2.02
MBD4O95243 SNORA29-201ENST00000384183 140 ntBASIC2.41□□□□□ -2.02
MBD4O95243 RNU6-790P-201ENST00000384479 105 ntBASIC2.41□□□□□ -2.02
MBD4O95243 RNA5SP450-201ENST00000411206 102 ntBASIC2.41□□□□□ -2.02
MBD4O95243 HMGN2P38-201ENST00000423806 265 ntBASIC2.41□□□□□ -2.02
MBD4O95243 HMGN2P3-201ENST00000433603 273 ntBASIC2.41□□□□□ -2.02
MBD4O95243 HMGN2P5-201ENST00000436882 273 ntBASIC2.41□□□□□ -2.02
MBD4O95243 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.41□□□□□ -2.02
MBD4O95243 RNU7-187P-201ENST00000458985 68 ntBASIC2.41□□□□□ -2.02
MBD4O95243 AC092989.1-201ENST00000481235 277 ntBASIC2.41□□□□□ -2.02
MBD4O95243 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.41□□□□□ -2.02
MBD4O95243 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.41□□□□□ -2.02
MBD4O95243 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.41□□□□□ -2.02
MBD4O95243 AC080078.2-201ENST00000603766 501 ntBASIC2.41□□□□□ -2.02
MBD4O95243 AC100810.6-201ENST00000638068 285 ntBASIC2.41□□□□□ -2.02
MBD4O95243 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
MBD4O95243 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.4□□□□□ -2.03
MBD4O95243 RNU5B-2P-201ENST00000363036 113 ntBASIC2.4□□□□□ -2.03
MBD4O95243 RNU6-784P-201ENST00000384330 106 ntBASIC2.4□□□□□ -2.03
MBD4O95243 RNU6-95P-201ENST00000384697 107 ntBASIC2.4□□□□□ -2.03
MBD4O95243 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
MBD4O95243 RNA5SP494-201ENST00000410653 129 ntBASIC2.4□□□□□ -2.03
MBD4O95243 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.4□□□□□ -2.03
MBD4O95243 DAP3P1-201ENST00000441522 278 ntBASIC2.4□□□□□ -2.03
MBD4O95243 PCMTD1P1-201ENST00000455560 355 ntBASIC2.4□□□□□ -2.03
MBD4O95243 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.4□□□□□ -2.03
MBD4O95243 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms