Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 Y_RNA.518-201ENST00000384552 113 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RNU4-70P-201ENST00000384579 139 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RNU6-1093P-201ENST00000391194 107 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 SNORA40C-201ENST00000391285 128 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RNU2-33P-201ENST00000410344 192 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RNU6-121P-201ENST00000410525 99 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RNU2-64P-201ENST00000411315 191 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.76□□□□□ -1.97
SMAD6O43541 RPL21P38-201ENST00000418090 167 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 AC007560.1-201ENST00000426912 237 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 TOMM20P4-201ENST00000427861 435 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RPEP5-201ENST00000441137 268 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 AL109933.2-201ENST00000452651 260 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 AC079354.2-201ENST00000453523 154 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 MTND4LP30-201ENST00000454092 297 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RPL39P38-201ENST00000467018 153 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 KC877373.1-201ENST00000479066 408 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RPL30P10-201ENST00000488148 337 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.76□□□□□ -1.97
SMAD6O43541 Y_RNA.673-201ENST00000516306 88 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 RNU6-911P-201ENST00000516523 104 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 ATP5F1P5-201ENST00000526403 760 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.76□□□□□ -1.97
SMAD6O43541 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.76□□□□□ -1.97
SMAD6O43541 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.76□□□□□ -1.97
SMAD6O43541 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.76□□□□□ -1.97
SMAD6O43541 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMAD6O43541 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.76□□□□□ -1.97
SMAD6O43541 AC135776.4-201ENST00000624300 1904 ntBASIC2.76□□□□□ -1.97
SMAD6O43541 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMAD6O43541 MIR26A1-201ENST00000362205 77 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 RNU6-209P-201ENST00000384118 107 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 RNU6-611P-201ENST00000384276 104 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 MIR9-1-201ENST00000385198 89 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 RNA5SP184-201ENST00000411071 108 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AC063976.3-201ENST00000426849 329 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AL356867.1-201ENST00000429623 299 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 MTCO3P29-201ENST00000432119 779 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.75□□□□□ -1.97
SMAD6O43541 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
SMAD6O43541 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.75□□□□□ -1.97
SMAD6O43541 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMAD6O43541 AC013470.1-201ENST00000453438 462 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 RPS29P27-201ENST00000463711 170 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 TRBVB-201ENST00000477100 408 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AC098869.1-201ENST00000481627 292 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.75□□□□□ -1.97
SMAD6O43541 HMGB1P35-201ENST00000503360 598 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.75□□□□□ -1.97
SMAD6O43541 RNA5SP165-201ENST00000517142 115 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AC109479.2-201ENST00000517842 174 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.75□□□□□ -1.97
SMAD6O43541 MIR4672-201ENST00000583126 81 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AC012433.1-201ENST00000588916 398 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 AL365434.2-201ENST00000607979 234 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 SDR42E1P4-201ENST00000620894 481 ntBASIC2.75□□□□□ -1.97
SMAD6O43541 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.75□□□□□ -1.97
SMAD6O43541 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.75□□□□□ -1.97
SMAD6O43541 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
SMAD6O43541 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.74□□□□□ -1.97
SMAD6O43541 RNU1-76P-201ENST00000362903 159 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 Y_RNA.183-201ENST00000363882 113 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMAD6O43541 SNORD88.1-201ENST00000408684 91 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
SMAD6O43541 snoU109.2-201ENST00000459316 135 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 UBE2DNL-203ENST00000474922 222 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 HMGB3P17-201ENST00000504195 649 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 AC025465.3-201ENST00000510570 311 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
SMAD6O43541 RNU6-572P-201ENST00000516724 80 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 AL590705.4-201ENST00000532209 134 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.74□□□□□ -1.97
SMAD6O43541 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
SMAD6O43541 AC073410.2-201ENST00000603240 332 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 AL645944.1-201ENST00000603857 493 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
SMAD6O43541 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.74□□□□□ -1.97
SMAD6O43541 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SMAD6O43541 Z75746.1-201ENST00000440243 2080 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SMAD6O43541 RNU6-212P-201ENST00000362642 104 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 RNU6-741P-201ENST00000383889 107 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 Y_RNA.515-201ENST00000384535 112 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 MIR34A-201ENST00000385130 110 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 AC139712.2-201ENST00000424302 339 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 AC009414.1-201ENST00000427200 443 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 MTND2P29-201ENST00000438595 412 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 AL078601.1-201ENST00000444542 271 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 RPL31P41-201ENST00000477967 372 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 RNU6-377P-201ENST00000515965 102 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 RNU6-111P-201ENST00000517179 105 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.73□□□□□ -1.97
SMAD6O43541 MIR3605-201ENST00000583214 100 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 RPL12P50-201ENST00000603116 116 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.73□□□□□ -1.97
SMAD6O43541 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SMAD6O43541 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SMAD6O43541 Y_RNA.27-201ENST00000362540 103 ntBASIC2.72□□□□□ -1.97
SMAD6O43541 RNU6-859P-201ENST00000362728 107 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms