Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AL158827.2-201ENST00000602494 330 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.06□□□□□ -1.92
PRPF3O43395 AL691447.3-201ENST00000635020 330 ntBASIC3.06□□□□□ -1.92
PRPF3O43395 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF3O43395 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PRPF3O43395 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PRPF3O43395 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF3O43395 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF3O43395 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.05□□□□□ -1.92
PRPF3O43395 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PRPF3O43395 MIR153-2-201ENST00000385225 87 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 AL353752.1-201ENST00000454946 260 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 AC021146.2-201ENST00000504736 556 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 RNA5SP356-201ENST00000515972 94 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 RNU6-1170P-201ENST00000515974 106 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 RNA5SP282-201ENST00000516355 108 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 MRPS36P4-201ENST00000534436 298 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.05□□□□□ -1.92
PRPF3O43395 AC090616.3-201ENST00000582184 217 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 AL355297.2-201ENST00000604792 129 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.05□□□□□ -1.92
PRPF3O43395 AC090517.3-201ENST00000625170 141 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.05□□□□□ -1.92
PRPF3O43395 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.05□□□□□ -1.92
PRPF3O43395 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PRPF3O43395 AC009487.2-201ENST00000420969 6821 ntBASIC3.05□□□□□ -1.92
PRPF3O43395 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF3O43395 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PRPF3O43395 RNU4-15P-201ENST00000362613 141 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 RNU2-52P-201ENST00000410680 190 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 AC087477.1-201ENST00000465747 340 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 RPL17P19-201ENST00000489069 552 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.04□□□□□ -1.92
PRPF3O43395 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF3O43395 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.04□□□□□ -1.92
PRPF3O43395 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.04□□□□□ -1.92
PRPF3O43395 MIR3124-201ENST00000582636 67 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 AL078605.1-201ENST00000603529 500 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 AC100812.1-201ENST00000607622 580 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 PCGEM1.1-201ENST00000613431 131 ntBASIC3.04□□□□□ -1.92
PRPF3O43395 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.03□□□□□ -1.92
PRPF3O43395 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.03□□□□□ -1.92
PRPF3O43395 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.03□□□□□ -1.92
PRPF3O43395 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PRPF3O43395 AC062016.1-201ENST00000355719 319 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 SNORD115-8-201ENST00000363856 82 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 RNU4-76P-201ENST00000364509 141 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 SNORD115-38-201ENST00000365037 82 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 MIR208B-201ENST00000401172 77 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PRPF3O43395 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.03□□□□□ -1.92
PRPF3O43395 AC108938.1-201ENST00000451204 136 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.03□□□□□ -1.92
PRPF3O43395 AC027575.1-201ENST00000481064 460 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 AC145146.1-201ENST00000496370 254 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 AC096725.1-201ENST00000514266 313 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.03□□□□□ -1.92
PRPF3O43395 SUB1P3-201ENST00000564581 315 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 AC005014.2-201ENST00000607795 599 ntBASIC3.03□□□□□ -1.92
PRPF3O43395 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.03□□□□□ -1.92
PRPF3O43395 snoU2_19.1-201ENST00000362361 80 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 RNU6-859P-201ENST00000362728 107 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 RNY1P16-201ENST00000363063 111 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 SNORA5B-201ENST00000363786 132 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 SNORA38-201ENST00000363946 132 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 RNU6-1040P-201ENST00000383974 107 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 MIR1294-201ENST00000408503 142 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AC007098.1-201ENST00000420122 367 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AC063976.3-201ENST00000426849 329 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 MTND1P14-201ENST00000427400 950 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AL353997.1-201ENST00000432936 108 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF3O43395 AC007215.1-201ENST00000464893 276 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AC068781.1-201ENST00000488231 618 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.02□□□□□ -1.93
PRPF3O43395 AC022493.2-201ENST00000506122 481 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AC091144.1-201ENST00000519573 138 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 MIR5701-3-201ENST00000578890 82 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 MIR5701-1-201ENST00000585138 82 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AC116312.1-201ENST00000606841 314 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 MIR5701-2-201ENST00000615634 82 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 AC090971.5-201ENST00000621102 293 ntBASIC3.02□□□□□ -1.93
PRPF3O43395 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF3O43395 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF3O43395 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF3O43395 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PRPF3O43395 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.02□□□□□ -1.93
PRPF3O43395 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRPF3O43395 RNU6-490P-201ENST00000362985 107 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 Y_RNA.394-201ENST00000383942 103 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 SNORA46.1-201ENST00000391069 153 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.01□□□□□ -1.93
PRPF3O43395 MIR2053-201ENST00000459295 91 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 AF186996.7-201ENST00000492781 209 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 RNU6-826P-201ENST00000516827 104 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 Y_RNA.706-201ENST00000516933 99 ntBASIC3.01□□□□□ -1.93
PRPF3O43395 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms