Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 FGF7P8-201ENST00000402994 292 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 MIR1289-2-201ENST00000408360 111 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 MIR1294-201ENST00000408503 142 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 RPL21P111-201ENST00000418453 477 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 HMGN2P3-201ENST00000433603 273 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 HMGN2P5-201ENST00000436882 273 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 RPL7P12-201ENST00000446719 750 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 FTH1P25-201ENST00000447665 469 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC130509.1-201ENST00000464158 433 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 FO393415.2-201ENST00000480085 343 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC068781.1-201ENST00000488231 618 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC018437.1-201ENST00000492214 406 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC005741.1-201ENST00000511094 432 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 SNORA31.25-201ENST00000517242 134 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 MRPS36P4-201ENST00000534436 298 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 CR383656.8-201ENST00000549046 145 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC110588.1-201ENST00000559699 137 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 MIR548S-201ENST00000581352 82 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 MIR4765-201ENST00000585007 77 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AL078605.1-201ENST00000603529 500 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AL713866.2-201ENST00000603579 219 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 RBM11P1-201ENST00000604951 799 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC009233.1-201ENST00000616477 371 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 AC099654.5-201ENST00000636479 350 ntBASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.73□□□□□ -2.13
TRIM49D1C9J1S8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 snoU2_19.1-201ENST00000362361 80 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-212P-201ENST00000362642 104 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.88-201ENST00000363029 99 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 SNORD116-11-201ENST00000383882 92 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 RNU1-148P-201ENST00000384472 162 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 SNORA12-201ENST00000391162 147 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 RPS29P13-201ENST00000402041 169 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AC019129.1-201ENST00000403786 261 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-373P-201ENST00000411247 98 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 RNA5SP270-201ENST00000411361 118 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AC003685.2-201ENST00000422795 395 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AIMP1P2-201ENST00000425294 312 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 TOMM20P4-201ENST00000427861 435 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 MTND4P18-201ENST00000447010 465 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 snoU13.6-201ENST00000458785 104 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 MTND5P5-201ENST00000503764 376 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 RNU2-19P-201ENST00000517288 84 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AC087854.1-201ENST00000519706 414 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AC093027.1-201ENST00000546698 429 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AL121579.1-201ENST00000555129 305 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 MIR3124-201ENST00000582636 67 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AC011712.1-201ENST00000588959 234 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AC078899.2-201ENST00000595282 212 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 AL096840.1-201ENST00000603287 93 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRIM49D1C9J1S8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-845P-201ENST00000362578 103 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-562P-201ENST00000362731 107 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 Y_RNA.339-201ENST00000365325 102 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-767P-201ENST00000384132 107 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 MIR186-201ENST00000384988 86 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 MTND3P8-201ENST00000412909 339 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AC138623.1-201ENST00000418060 216 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 MTCO3P46-201ENST00000425787 232 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 USP9YP30-201ENST00000430729 455 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 RPS3AP52-201ENST00000435639 297 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 MTND1P17-201ENST00000448961 204 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 PRDX4P1-201ENST00000507189 574 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-566P-201ENST00000516790 107 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 RNU6-612P-201ENST00000516909 102 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 RNA5SP454-201ENST00000517231 127 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AC079598.5-201ENST00000547460 117 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AC026371.1-201ENST00000551867 419 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 MIR4790-201ENST00000577799 79 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AC007229.1-201ENST00000590455 412 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AL355073.2-201ENST00000612106 557 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 uc_338.15-201ENST00000615470 191 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AL159153.1-201ENST00000619688 317 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AC092794.2-201ENST00000620933 563 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AC112487.2-201ENST00000637950 304 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 AL359854.1-201ENST00000614203 1594 ntBASIC1.71□□□□□ -2.14
TRIM49D1C9J1S8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM49D1C9J1S8 RNU1-23P-201ENST00000363361 144 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms