Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
NR2E3Q9Y5X4 AC005592.1-201ENST00000566527 1640 ntBASIC3.26□□□□□ -1.89
NR2E3Q9Y5X4 AC093831.2-201ENST00000624393 3427 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-1222P-201ENST00000384615 107 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 Y_RNA.557-201ENST00000384680 107 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 RNU2-23P-201ENST00000410545 195 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 MTCYBP9-201ENST00000431021 303 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AC079354.2-201ENST00000453523 154 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AL353752.1-201ENST00000454946 260 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AC096772.1-201ENST00000609146 564 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 7SK.10-201ENST00000621414 298 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AL606534.2-204ENST00000635008 178 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 MTND5P9-201ENST00000503854 1755 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.25□□□□□ -1.89
NR2E3Q9Y5X4 AC002543.1-201ENST00000299783 1954 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 RNY1P16-201ENST00000363063 111 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 RNA5SP68-201ENST00000363885 119 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 SNORD32A-201ENST00000364805 84 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 Y_RNA.455-201ENST00000384230 98 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 MIR544A-201ENST00000384855 91 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 MIR9-1-201ENST00000385198 89 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 RPL23AP95-201ENST00000426806 265 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 RPL23AP50-201ENST00000434149 455 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 AC099799.1-201ENST00000439809 192 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 RPL21P2-201ENST00000440049 481 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 AL031659.1-201ENST00000447075 539 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 MTCO2P24-201ENST00000515611 426 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 GNAI2P1-201ENST00000541815 315 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 RPS15AP11-201ENST00000594193 385 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 MIR6817-201ENST00000615588 66 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 AL132822.1-201ENST00000617063 513 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 AC087588.2-201ENST00000617667 426 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 UCA1.1-201ENST00000620952 75 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 MIR4272-201ENST00000635924 64 ntBASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NR2E3Q9Y5X4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC099654.7-201ENST00000635788 2127 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC009541.1-201ENST00000438279 2662 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 Y_RNA.106-201ENST00000363189 100 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-1141P-201ENST00000364520 107 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 RNU4-42P-201ENST00000364738 142 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 Y_RNA.577-201ENST00000384794 101 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-823P-201ENST00000391042 103 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 SNORA3.2-201ENST00000408221 125 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 EIF1AXP1-201ENST00000419267 435 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 RAC1P5-201ENST00000512182 576 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-475P-201ENST00000516073 104 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-991P-201ENST00000516168 107 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-264P-201ENST00000517134 104 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 IGKV3-31-201ENST00000523109 329 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 MIR3671-201ENST00000580455 88 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC025754.2-201ENST00000606491 432 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC009318.2-201ENST00000610917 651 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC007792.1-201ENST00000623023 402 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 AC002064.3-201ENST00000623448 346 ntBASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.23□□□□□ -1.89
NR2E3Q9Y5X4 ZNF299P-201ENST00000406845 1804 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-595P-201ENST00000363944 107 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 RNY3P11-201ENST00000364153 102 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-450P-201ENST00000364654 107 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 MIR592-201ENST00000384959 97 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 RNU6-1156P-201ENST00000410365 100 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 AL591806.2-201ENST00000433122 173 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 RPS29P21-201ENST00000496272 170 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
NR2E3Q9Y5X4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms