Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL133396.1-201ENST00000432048 687 ntBASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 AL109918.3-201ENST00000603072 338 ntBASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 FAM157A-202ENST00000615155 405 ntBASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 AC098679.4-201ENST00000624241 654 ntBASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.11□□□□□ -2.07
PCDHGA1Q9Y5H4 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-142P-201ENST00000384019 107 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 SNORA67.3-201ENST00000384366 140 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 Y_RNA.573-201ENST00000384763 105 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-192P-201ENST00000391253 100 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AL033519.2-201ENST00000403958 392 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-373P-201ENST00000411247 98 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AP000275.1-201ENST00000411943 390 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AL445646.1-201ENST00000431784 216 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 NDUFA5P4-201ENST00000436704 385 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 SNRPGP7-201ENST00000469016 106 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AC092436.3-201ENST00000511788 257 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AC087241.2-201ENST00000535801 324 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 HSPE1P4-201ENST00000550617 308 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AL096840.1-201ENST00000603287 93 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AL132822.1-201ENST00000617063 513 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 MIR3688-2-201ENST00000636963 87 ntBASIC2.1□□□□□ -2.07
PCDHGA1Q9Y5H4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-534P-201ENST00000364877 106 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-214P-201ENST00000384130 107 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 RNA5SP247-201ENST00000411181 105 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 UBE2V1P4-201ENST00000425374 344 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 UBE2V1P8-201ENST00000437166 265 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AC008628.2-201ENST00000502605 298 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AC011352.1-201ENST00000512300 793 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 RNU6-1332P-201ENST00000516666 104 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AC104576.1-201ENST00000524225 88 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 TRAV32-201ENST00000553993 340 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AP000942.3-201ENST00000603702 160 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AC080078.2-201ENST00000603766 501 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 CTHRC1P1-201ENST00000605383 469 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 AL359314.1-201ENST00000616913 261 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 SNORD98-201ENST00000636377 67 ntBASIC2.09□□□□□ -2.07
PCDHGA1Q9Y5H4 MTND4P23-201ENST00000447723 1363 ntBASIC2.09□□□□□ -2.08
PCDHGA1Q9Y5H4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
PCDHGA1Q9Y5H4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU4-15P-201ENST00000362613 141 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 SNORD113-7-201ENST00000363762 77 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-944P-201ENST00000364023 107 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.295-201ENST00000364918 102 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU1-51P-201ENST00000365345 176 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-877P-201ENST00000383868 107 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.453-201ENST00000384223 109 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.530-201ENST00000384587 101 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 SNORD115-47-201ENST00000391226 86 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AL023284.1-201ENST00000403956 276 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 MIR1294-201ENST00000408503 142 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU2-48P-201ENST00000410694 191 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 MTND2P29-201ENST00000438595 412 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RPL9P9-202ENST00000466501 579 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RPS29P25-201ENST00000481709 171 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AC016632.1-201ENST00000503994 196 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RPL39P5-202ENST00000512505 151 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU6-612P-201ENST00000516909 102 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 SCOCP1-201ENST00000554676 349 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AC011494.1-201ENST00000596454 237 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AL034555.1-201ENST00000604816 211 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AP000654.2-201ENST00000605633 586 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AC063943.3-201ENST00000615562 356 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 AC091932.3-201ENST00000624223 323 ntBASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
PCDHGA1Q9Y5H4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC092268.1-201ENST00000342691 405 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 Y_RNA.100-201ENST00000363141 102 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 SNORA26.3-201ENST00000391119 136 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 FCF1P9-201ENST00000412546 282 ntBASIC2.07□□□□□ -2.08
PCDHGA1Q9Y5H4 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms