Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC007684.1-201ENST00000609671 477 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 FER-210ENST00000628534 558 ntTSL 5 BASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC024614.3-201ENST00000637860 256 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC073869.6-201ENST00000640656 341 ntBASIC1.34□□□□□ -2.2
SHANK1Q9Y566 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 MTND5P10-201ENST00000603719 1809 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 SNORD113-7-201ENST00000363762 77 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RNU6-43P-201ENST00000384302 107 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 MIR598-201ENST00000384868 97 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 EDDM3CP-201ENST00000415977 425 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AL117339.3-201ENST00000418733 162 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AC016907.1-201ENST00000419483 435 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RNU7-180P-201ENST00000459240 63 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 snoU109.2-201ENST00000459316 135 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RNU6-1208P-201ENST00000459588 107 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RPL22P13-201ENST00000493291 347 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RNU6-1281P-201ENST00000516223 105 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 VN1R107P-201ENST00000601784 209 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AL158032.1-201ENST00000605401 106 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AC012557.2-201ENST00000605919 418 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AC103705.1-201ENST00000619013 241 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AC139792.3-201ENST00000623525 224 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 AC068137.4-201ENST00000638485 296 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RBBP8P1-201ENST00000449447 1844 ntBASIC1.33□□□□□ -2.2
SHANK1Q9Y566 RNU6-715P-201ENST00000365204 103 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL353193.1-201ENST00000421444 268 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL139109.1-201ENST00000455491 297 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 U8.21-201ENST00000459536 136 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 HMGB3P3-201ENST00000510526 400 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 SNORA31.18-201ENST00000517043 134 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RN7SKP256-201ENST00000517201 314 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 MTND1P35-201ENST00000526739 508 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL137100.2-201ENST00000555786 315 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC069294.1-201ENST00000608397 350 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC084782.3-201ENST00000612282 578 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RNU6-266P-201ENST00000364225 107 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RNU6-522P-201ENST00000364497 107 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RNU6-1317P-201ENST00000364582 104 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RNU6-282P-201ENST00000365357 103 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RNU6-622P-201ENST00000384272 103 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AIMP1P2-201ENST00000425294 312 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL513185.2-201ENST00000425543 193 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 MTCO3P46-201ENST00000425787 232 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC092001.1-201ENST00000453012 261 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 snoU13.14-201ENST00000459372 104 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 TRBVA-201ENST00000498804 316 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RBBP4P6-201ENST00000508098 202 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 MTND3P25-201ENST00000509243 135 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 RNU6-123P-201ENST00000516163 102 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 Y_RNA.682-201ENST00000516457 100 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC104576.1-201ENST00000524225 88 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 MIR5583-1-201ENST00000580941 59 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AC091152.3-201ENST00000604227 325 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 ELOCP5-201ENST00000604924 333 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 uc_338.15-201ENST00000615470 191 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 uc_338.34-201ENST00000617467 174 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.32□□□□□ -2.2
SHANK1Q9Y566 OR4G1P-203ENST00000641984 1631 ntBASIC1.32□□□□□ -2.2
SHANK1Q9Y566 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
SHANK1Q9Y566 RNU6-486P-201ENST00000363116 107 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 Y_RNA.100-201ENST00000363141 102 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 RNU6-1210P-201ENST00000363775 107 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 RNA5SP363-201ENST00000365072 115 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 RNU6-510P-201ENST00000391239 108 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 BTF3L4P2-201ENST00000392798 346 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 AC092809.3-201ENST00000415453 231 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SHANK1Q9Y566 SNAP23P1-201ENST00000433229 246 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.31□□□□□ -2.2
SHANK1Q9Y566 RNU6-1037P-201ENST00000459571 107 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.31□□□□□ -2.2
SHANK1Q9Y566 RNU2-69P-201ENST00000516061 100 ntBASIC1.31□□□□□ -2.2
SHANK1Q9Y566 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms