Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DEFB108C-201ENST00000400154 252 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 RNU7-14P-201ENST00000459331 62 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 RPS29P27-201ENST00000463711 170 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AC083798.1-201ENST00000472671 131 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 RPL38P4-201ENST00000502376 214 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-612P-201ENST00000516909 102 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AC104383.1-201ENST00000530297 370 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AL118558.2-201ENST00000556294 238 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AC090517.1-201ENST00000569307 266 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 MTND4P23-201ENST00000447723 1363 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 AC009541.1-201ENST00000438279 2662 ntBASIC1.42□□□□□ -2.18
KCNIP3Q9Y2W7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 MIR424-201ENST00000362227 98 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-227P-201ENST00000362865 103 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-112P-201ENST00000363599 104 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-38P-201ENST00000384085 107 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-1119P-201ENST00000384349 108 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AL645568.3-201ENST00000433683 316 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 MTCO1P44-201ENST00000441935 243 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 RNU6-261P-201ENST00000459506 102 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AC097473.1-201ENST00000508142 408 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 RNA5SP182-201ENST00000516064 82 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 Y_RNA.688-201ENST00000516565 95 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AC087854.1-201ENST00000519706 414 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AC092747.3-201ENST00000603769 301 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AC025811.1-201ENST00000604312 472 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 AC139792.3-201ENST00000623525 224 ntBASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.41□□□□□ -2.18
KCNIP3Q9Y2W7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 MIR126-201ENST00000362291 85 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 Y_RNA.333-201ENST00000365274 102 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-338P-201ENST00000383888 105 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-439P-201ENST00000384188 106 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 RNY3P9-201ENST00000384727 106 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 SNORD37.1-201ENST00000390968 65 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 RN7SKP51-201ENST00000410781 304 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AL663109.1-201ENST00000411498 844 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC007395.1-201ENST00000451333 677 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC010531.2-201ENST00000465012 153 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC087477.1-201ENST00000465747 340 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 Y_RNA.654-201ENST00000497848 106 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC108043.1-201ENST00000512696 574 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC025465.4-201ENST00000513422 638 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 RNA5SP401-201ENST00000515920 127 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 SUMO2P18-201ENST00000518873 252 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC027807.1-201ENST00000559921 996 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 RN7SKP299-201ENST00000606679 301 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 AC064836.2-201ENST00000609491 462 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.4□□□□□ -2.19
KCNIP3Q9Y2W7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1322P-201ENST00000364309 107 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 RNU4-20P-201ENST00000365601 151 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 Y_RNA.378-201ENST00000365652 113 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 SNORD116-9-201ENST00000384000 95 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 SNORD116-3-201ENST00000384287 95 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 SNORD116-7-201ENST00000384404 95 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 SNORD116-5-201ENST00000384462 95 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-296P-201ENST00000384608 107 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AL079342.1-201ENST00000401460 267 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 RPL9P9-202ENST00000466501 579 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AC023790.1-201ENST00000482174 347 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 RPS23P5-201ENST00000495419 428 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AC091885.1-201ENST00000506658 268 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 RNU6-1038P-201ENST00000516516 104 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 MIR5094-201ENST00000578766 85 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 MIR3611-201ENST00000584484 83 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.39□□□□□ -2.19
KCNIP3Q9Y2W7 AC092881.1-201ENST00000638218 2733 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms