Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR1244-4-202ENST00000636813 85 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC233981.2-201ENST00000611524 1614 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 AC091812.1-201ENST00000432235 1948 ntBASIC3.07□□□□□ -1.92
SSX2IPQ9Y2D8 RNU4-9P-201ENST00000364951 139 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 RNA5SP126-201ENST00000365092 109 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.389-201ENST00000383924 113 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-142P-201ENST00000384019 107 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-19P-201ENST00000384718 107 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-1105P-201ENST00000384774 107 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 MIR544A-201ENST00000384855 91 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 MIR9-1-201ENST00000385198 89 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.645-201ENST00000391229 102 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 FO393413.1-201ENST00000402892 195 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC096649.2-201ENST00000416186 393 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC021146.2-201ENST00000504736 556 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 SEM1P1-201ENST00000506694 209 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 SNORA31.21-201ENST00000517180 77 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC022616.4-201ENST00000522985 181 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AL117187.1-201ENST00000555482 181 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 AC100812.1-201ENST00000607622 580 ntBASIC3.06□□□□□ -1.92
SSX2IPQ9Y2D8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.133-201ENST00000363428 110 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 RNA5SP139-201ENST00000364340 117 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 SNORD32A-201ENST00000364805 84 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-1286P-201ENST00000383871 107 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-968P-201ENST00000384076 107 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 SNORA18.3-201ENST00000384122 132 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.485-201ENST00000384395 102 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 SNORA12.2-201ENST00000391040 156 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 HMGN2P35-201ENST00000412164 270 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 PTGES3P4-201ENST00000426243 356 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 RPL23AP95-201ENST00000426806 265 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AL441985.1-201ENST00000457727 251 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC107626.1-201ENST00000471084 183 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 RN7SL633P-201ENST00000488974 297 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC091144.1-201ENST00000519573 138 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC016256.1-201ENST00000547971 354 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 VN1R91P-201ENST00000594377 169 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC091152.3-201ENST00000604227 325 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC002064.3-201ENST00000623448 346 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 AC138305.3-201ENST00000624988 240 ntBASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.05□□□□□ -1.92
SSX2IPQ9Y2D8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.144-201ENST00000363521 113 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-1141P-201ENST00000364520 107 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 SNORD14.1-201ENST00000365609 90 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 Y_RNA.526-201ENST00000384572 110 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-1222P-201ENST00000384615 107 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-748P-201ENST00000384648 107 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 SNORA69.1-201ENST00000390904 137 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 MIR190B-201ENST00000401119 79 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AL139095.1-201ENST00000404326 391 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 RNU2-49P-201ENST00000410666 184 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 MTCO3P19-201ENST00000415864 321 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AC096644.2-201ENST00000429278 159 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AL109933.2-201ENST00000452651 260 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AP001025.1-201ENST00000486139 332 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AC104564.1-201ENST00000493028 407 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AC093852.1-201ENST00000503587 266 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-911P-201ENST00000516523 104 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 RNU5B-3P-201ENST00000516601 115 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AC025281.1-201ENST00000567026 265 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AC113195.1-201ENST00000579952 141 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 MIR5188-201ENST00000583467 113 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AC104984.5-201ENST00000586878 94 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AL132822.1-201ENST00000617063 513 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 AC087588.2-201ENST00000617667 426 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 MIR6733-201ENST00000635723 61 ntBASIC3.04□□□□□ -1.92
SSX2IPQ9Y2D8 RBBP8P1-201ENST00000449447 1844 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 AC010889.1-201ENST00000566193 2666 ntBASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SSX2IPQ9Y2D8 RNU6-1309P-201ENST00000363305 108 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms