Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 SUMO1P4-201ENST00000429430 302 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AC004383.1-201ENST00000438135 289 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 RPL30P12-201ENST00000474666 353 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 RNU6-307P-201ENST00000516743 106 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 SNORD19.2-201ENST00000516978 73 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 RNU6-264P-201ENST00000517134 104 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 MRPS36P4-201ENST00000534436 298 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 MIR5194-201ENST00000582634 120 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AC009318.2-201ENST00000610917 651 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AC024581.2-201ENST00000619986 252 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 MTND5P9-201ENST00000503854 1755 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 RNU6-490P-201ENST00000362985 107 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 RNY1P16-201ENST00000363063 111 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.112-201ENST00000363250 102 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 RNU1-138P-201ENST00000384093 164 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 MIR767-201ENST00000390228 109 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AC018865.2-201ENST00000423631 129 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AL160004.2-201ENST00000432935 350 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AC108938.1-201ENST00000451204 136 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AC079354.2-201ENST00000453523 154 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 RPL31P41-201ENST00000477967 372 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AL049873.1-201ENST00000480540 376 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 RPL17P19-201ENST00000489069 552 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 RNU6-976P-201ENST00000516086 111 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 CBX3P7-201ENST00000532876 502 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 MIR5696-201ENST00000578474 85 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AL355877.2-201ENST00000603670 358 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 AC007485.1-201ENST00000616755 206 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 MIR3529-201ENST00000637713 78 ntBASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.53□□□□□ -2
SMARCAL1Q9NZC9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 SNORD32A-201ENST00000364805 84 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-622P-201ENST00000384272 103 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-784P-201ENST00000384330 106 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 EIF4EP2-201ENST00000422816 654 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 RPS15AP7-201ENST00000439294 405 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AL035666.1-201ENST00000446195 348 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AL109933.2-201ENST00000452651 260 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AC107626.1-201ENST00000471084 183 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AC105758.1-201ENST00000506038 399 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 RN7SKP295-201ENST00000517264 153 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 PRELID2P1-201ENST00000552837 301 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AC016925.2-201ENST00000605108 242 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 AC005336.3-201ENST00000623833 2679 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 MTND4P1-201ENST00000457501 1466 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 ZNF299P-201ENST00000406845 1804 ntBASIC2.52□□□□□ -2.01
SMARCAL1Q9NZC9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.28-201ENST00000362554 111 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.148-201ENST00000363557 117 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.202-201ENST00000364083 110 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 Y_RNA.252-201ENST00000364556 101 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-748P-201ENST00000384648 107 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 MIR147B-201ENST00000390185 80 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AC096649.2-201ENST00000416186 393 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AC008267.5-201ENST00000424928 265 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AC090897.2-201ENST00000581715 130 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AL391813.1-201ENST00000603098 260 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 AC006157.1-201ENST00000611750 366 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMARCAL1Q9NZC9 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-595P-201ENST00000363944 107 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 RNY3P11-201ENST00000364153 102 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 SNORA33.2-201ENST00000365413 134 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 RNY1P14-201ENST00000384426 108 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 RNU6-1156P-201ENST00000410365 100 ntBASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.5□□□□□ -2.01
SMARCAL1Q9NZC9 MCFD2P1-201ENST00000417812 300 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms