Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 EEF1A1P39-201ENST00000440791 250 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 MTND5P2-201ENST00000442927 1142 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RNA5SP481-201ENST00000516814 122 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC090142.3-201ENST00000519012 385 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC123904.2-201ENST00000548059 300 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 ZNF321P-202ENST00000550843 495 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC021231.3-201ENST00000558497 370 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC004817.2-201ENST00000561794 651 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 BX284668.6-201ENST00000606899 438 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AL031775.1-201ENST00000607014 887 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC091925.1-201ENST00000623204 462 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-105P-201ENST00000363909 104 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-505P-201ENST00000384427 107 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 MIR515-2-201ENST00000384883 83 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 MIR515-1-201ENST00000384884 83 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AL358176.2-201ENST00000425769 204 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC021146.8-201ENST00000507455 733 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 MTND3P5-201ENST00000512798 333 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-322P-201ENST00000516010 103 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AC115990.1-201ENST00000526957 301 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 AL590095.2-201ENST00000604136 117 ntBASIC0.46□□□□□ -2.34
KIAA1549Q9HCM3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-621P-201ENST00000364752 109 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 SNORD116.1-201ENST00000365628 92 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 RNA5SP201-201ENST00000410316 124 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 RPS24P1-201ENST00000438550 371 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 SNORD60.2-201ENST00000516883 86 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-201P-201ENST00000517100 61 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 MTCO2P2-201ENST00000591258 225 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AL596327.1-201ENST00000603629 213 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AL034555.1-201ENST00000604816 211 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AL158042.1-201ENST00000605338 460 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AL021368.1-201ENST00000607490 540 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC091965.4-201ENST00000607691 587 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC097478.2-201ENST00000610572 514 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC121333.1-201ENST00000567488 2709 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-1141P-201ENST00000364520 107 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 SNRPEP8-201ENST00000442866 260 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-567P-201ENST00000516746 107 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 MIR1273G-201ENST00000577677 100 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC136475.10-201ENST00000620253 385 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 AC068787.1-201ENST00000623908 691 ntBASIC0.45□□□□□ -2.34
KIAA1549Q9HCM3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-25P-201ENST00000383873 107 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-48P-201ENST00000384161 107 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-1065P-201ENST00000384513 106 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-15P-201ENST00000384534 107 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-29P-201ENST00000384637 107 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 SNORA12.2-201ENST00000391040 156 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 EEF1A1P40-201ENST00000412883 573 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 AC092809.3-201ENST00000415453 231 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 MIR4709-201ENST00000577272 72 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 MIR3923-201ENST00000579521 83 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 AC107304.1-201ENST00000604229 296 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 AL138960.2-201ENST00000625145 535 ntBASIC0.44□□□□□ -2.34
KIAA1549Q9HCM3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 RNU6-384P-201ENST00000364900 104 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 Y_RNA.302-201ENST00000364997 102 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 MIR558-201ENST00000384920 94 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 RNU2-70P-201ENST00000410718 179 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 RPS25P9-201ENST00000435591 252 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC245047.7-201ENST00000440265 293 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC016925.1-201ENST00000458303 298 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC010531.2-201ENST00000465012 153 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AP000797.1-201ENST00000478870 387 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AL139286.2-201ENST00000606838 396 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC144521.1-201ENST00000607148 956 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AL589743.1-201ENST00000551932 2712 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 Y_RNA.324-201ENST00000365165 102 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 RNA5SP259-201ENST00000365541 109 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 MIR193B-201ENST00000384907 83 ntBASIC0.43□□□□□ -2.34
KIAA1549Q9HCM3 AC060773.1-201ENST00000421698 310 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms