Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC060773.1-201ENST00000421698 310 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AC069257.2-201ENST00000441819 155 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 MTCYBP1-201ENST00000454315 1119 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AC007547.1-201ENST00000462177 490 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AC016632.1-201ENST00000503994 196 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AK3P2-201ENST00000507976 429 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AC136932.1-201ENST00000574771 208 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.74□□□□□ -2.29
NKX6-2Q9C056 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AC027335.2-201ENST00000624030 375 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AL450472.1-202ENST00000637286 180 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.74□□□□□ -2.29
NKX6-2Q9C056 RNU6-545P-201ENST00000362681 104 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 Y_RNA.111-201ENST00000363248 100 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 SNORD113-6-201ENST00000363345 75 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 RNU6-169P-201ENST00000365336 107 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 MTCO2P8-201ENST00000412213 658 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AL354692.1-201ENST00000423044 315 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 RPL23AP95-201ENST00000426806 265 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC013470.1-201ENST00000453438 462 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.73□□□□□ -2.29
NKX6-2Q9C056 RPS23P5-201ENST00000495419 428 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC093852.1-201ENST00000503587 266 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC011406.1-201ENST00000512440 370 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.73□□□□□ -2.29
NKX6-2Q9C056 RNA5SP384-201ENST00000516615 116 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC090572.1-201ENST00000519251 160 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC022878.1-201ENST00000530684 149 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AP000873.5-201ENST00000533906 236 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.73□□□□□ -2.29
NKX6-2Q9C056 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AL442163.3-201ENST00000554110 156 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 DNAJC19P9-201ENST00000555084 351 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC103996.1-201ENST00000555468 102 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 CYP4A27P-201ENST00000567218 190 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 MIR4303-201ENST00000581299 66 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AL022345.2-201ENST00000606307 135 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 AC106754.1-201ENST00000562632 1513 ntBASIC0.73□□□□□ -2.29
NKX6-2Q9C056 RNU6-500P-201ENST00000362349 107 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 SNORD114-2-201ENST00000363953 78 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 RNU6-827P-201ENST00000365553 106 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 SNORA18.2-201ENST00000383865 132 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 RPS29P13-201ENST00000402041 169 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AL133396.1-201ENST00000432048 687 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC002486.1-201ENST00000435098 391 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 TAF9P1-201ENST00000445421 515 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 Z73417.1-201ENST00000447373 778 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 TAF9P2-201ENST00000454958 515 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 C1DP4-201ENST00000455429 424 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 MTCO2P6-201ENST00000463134 685 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 RPS23P4-201ENST00000487908 423 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC103851.1-201ENST00000506833 274 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 MTCO3P7-201ENST00000510008 774 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC119751.5-201ENST00000514077 770 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.72□□□□□ -2.29
NKX6-2Q9C056 TMF1P1-201ENST00000576058 373 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 MIR3664-201ENST00000579074 99 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AF131215.7-201ENST00000602443 707 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC091805.2-201ENST00000603848 235 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC009994.1-201ENST00000606889 253 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AP000240.1-201ENST00000609910 452 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 MIR6078-201ENST00000611069 100 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC091304.9-201ENST00000612091 226 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 AC008250.2-201ENST00000615261 205 ntBASIC0.72□□□□□ -2.29
NKX6-2Q9C056 MTND5P17-201ENST00000418405 1603 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
NKX6-2Q9C056 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
NKX6-2Q9C056 RNU6-968P-201ENST00000384076 107 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 HSFY7P-201ENST00000432672 318 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 HSFY8P-201ENST00000437934 318 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 AC073614.1-201ENST00000438690 650 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.71□□□□□ -2.3
NKX6-2Q9C056 RPS29P15-201ENST00000458329 171 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 snoU13.15-201ENST00000459407 104 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.71□□□□□ -2.3
NKX6-2Q9C056 Vault.3-201ENST00000516676 95 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 RNU6-410P-201ENST00000517006 107 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 DEFB131C-201ENST00000528817 165 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 ELOCP32-201ENST00000548625 324 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 AC098848.2-201ENST00000588023 330 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 Z99289.3-201ENST00000605586 594 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 AL353149.1-201ENST00000610667 244 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 AL078595.3-201ENST00000623815 1166 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 SNORA43.4-201ENST00000629559 138 ntBASIC0.71□□□□□ -2.3
NKX6-2Q9C056 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
NKX6-2Q9C056 MIR515-2-201ENST00000384883 83 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 MIR515-1-201ENST00000384884 83 ntBASIC0.7□□□□□ -2.3
NKX6-2Q9C056 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms