Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 Vault.3-201ENST00000516676 95 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 RNA5SP481-201ENST00000516814 122 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 RAB11AP2-201ENST00000545905 639 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 AC098848.2-201ENST00000588023 330 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 VN1R107P-201ENST00000601784 209 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 AL356157.2-201ENST00000605122 111 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 Z99289.3-201ENST00000605586 594 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 AC005014.3-201ENST00000605985 190 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 MIR3976-201ENST00000606807 139 ntBASIC1.02□□□□□ -2.25
VAT1Q99536 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.02□□□□□ -2.25
VAT1Q99536 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VAT1Q99536 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
VAT1Q99536 MTND5P35-201ENST00000557537 1720 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 Y_RNA.598-201ENST00000410480 95 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.01□□□□□ -2.25
VAT1Q99536 MTCO1P21-201ENST00000416634 589 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 ARL5AP1-201ENST00000418991 388 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.01□□□□□ -2.25
VAT1Q99536 EIF1P1-201ENST00000421436 341 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.01□□□□□ -2.25
VAT1Q99536 AL133396.1-201ENST00000432048 687 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 SNAP23P1-201ENST00000433229 246 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 MTND2P39-201ENST00000457230 764 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 MTND2P14-201ENST00000482139 351 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.01□□□□□ -2.25
VAT1Q99536 MRPS36P3-201ENST00000519284 130 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 EIF4A1P12-201ENST00000551910 141 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 AC090115.3-201ENST00000553218 849 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.01□□□□□ -2.25
VAT1Q99536 CYP3A52P-201ENST00000563326 91 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.01□□□□□ -2.25
VAT1Q99536 MIR4775-201ENST00000581168 75 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 AL359821.1-201ENST00000605519 182 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 AC008945.2-201ENST00000606056 604 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.01□□□□□ -2.25
VAT1Q99536 AL450472.1-202ENST00000637286 180 ntBASIC1.01□□□□□ -2.25
VAT1Q99536 AC092268.1-201ENST00000342691 405 ntBASIC1□□□□□ -2.25
VAT1Q99536 RNU6-1214P-201ENST00000363650 109 ntBASIC1□□□□□ -2.25
VAT1Q99536 RNU1-96P-201ENST00000364163 162 ntBASIC1□□□□□ -2.25
VAT1Q99536 SNORA25.8-201ENST00000364831 128 ntBASIC1□□□□□ -2.25
VAT1Q99536 RNU6-53P-201ENST00000365367 106 ntBASIC1□□□□□ -2.25
VAT1Q99536 MIR194-1-201ENST00000384892 85 ntBASIC1□□□□□ -2.25
VAT1Q99536 AL117342.1-201ENST00000404861 406 ntBASIC1□□□□□ -2.25
VAT1Q99536 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1□□□□□ -2.25
VAT1Q99536 AL117339.3-201ENST00000418733 162 ntBASIC1□□□□□ -2.25
VAT1Q99536 MRPL35P3-201ENST00000421557 364 ntBASIC1□□□□□ -2.25
VAT1Q99536 RPL23AP95-201ENST00000426806 265 ntBASIC1□□□□□ -2.25
VAT1Q99536 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1□□□□□ -2.25
VAT1Q99536 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1□□□□□ -2.25
VAT1Q99536 AC007395.1-201ENST00000451333 677 ntBASIC1□□□□□ -2.25
VAT1Q99536 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1□□□□□ -2.25
VAT1Q99536 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1□□□□□ -2.25
VAT1Q99536 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1□□□□□ -2.25
VAT1Q99536 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1□□□□□ -2.25
VAT1Q99536 FABP5P5-201ENST00000515537 406 ntBASIC1□□□□□ -2.25
VAT1Q99536 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1□□□□□ -2.25
VAT1Q99536 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1□□□□□ -2.25
VAT1Q99536 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1□□□□□ -2.25
VAT1Q99536 BNIP3P8-201ENST00000597863 560 ntBASIC1□□□□□ -2.25
VAT1Q99536 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
VAT1Q99536 AL022161.1-201ENST00000604390 213 ntBASIC1□□□□□ -2.25
VAT1Q99536 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
VAT1Q99536 RNU1-76P-201ENST00000362903 159 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 RNU6-74P-201ENST00000384235 107 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 Y_RNA.595-201ENST00000410403 105 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 AL593851.1-201ENST00000426171 157 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.99□□□□□ -2.25
VAT1Q99536 Z73417.1-201ENST00000447373 778 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 AL133217.1-201ENST00000450980 425 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 MTCO2P6-201ENST00000463134 685 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 AC091874.1-201ENST00000511402 339 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 RNU6-1041P-201ENST00000516254 102 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 RNU6-410P-201ENST00000517006 107 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.99□□□□□ -2.25
VAT1Q99536 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.99□□□□□ -2.25
VAT1Q99536 MIR4498-201ENST00000577599 66 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.99□□□□□ -2.25
VAT1Q99536 AC091805.2-201ENST00000603848 235 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 Z98751.3-201ENST00000604447 521 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 CTHRC1P1-201ENST00000605383 469 ntBASIC0.99□□□□□ -2.25
VAT1Q99536 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.98□□□□□ -2.25
VAT1Q99536 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
VAT1Q99536 RNU6-552P-201ENST00000362869 119 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 RNU4-28P-201ENST00000364739 141 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 RNU6-331P-201ENST00000384724 107 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 MIR454-201ENST00000390180 115 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.98□□□□□ -2.25
VAT1Q99536 AL596276.1-201ENST00000434465 418 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.98□□□□□ -2.25
VAT1Q99536 AL163973.1-201ENST00000484753 577 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 AC016632.1-201ENST00000503994 196 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 AC103996.1-201ENST00000555468 102 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.98□□□□□ -2.25
VAT1Q99536 CYP4A27P-201ENST00000567218 190 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 AP005136.1-201ENST00000579765 429 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 AC009033.1-201ENST00000624279 431 ntBASIC0.98□□□□□ -2.25
VAT1Q99536 AC091895.1-201ENST00000624494 256 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms