Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX11Q96FC9 RNA5SP38-201ENST00000410750 119 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.72□□□□□ -1.81
DDX11Q96FC9 AC092047.1-201ENST00000424997 240 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.72□□□□□ -1.81
DDX11Q96FC9 RPL21P40-201ENST00000428586 483 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX11Q96FC9 AL031659.1-201ENST00000447075 539 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 snoU13.30-201ENST00000458951 104 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 RPL30P1-201ENST00000488676 339 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 RNA5SP217-201ENST00000515959 91 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 SNORA43.2-201ENST00000516652 128 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 SNORD59.2-201ENST00000516873 68 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 RNA5SP291-201ENST00000517222 105 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 AC245166.1-201ENST00000521012 253 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 AC023824.2-201ENST00000566185 400 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 MIR4643-201ENST00000577473 78 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 AC006386.2-201ENST00000624491 75 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 AC012005.1-201ENST00000624575 75 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 SCARNA4-202ENST00000625402 129 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
DDX11Q96FC9 U2.21-201ENST00000637295 81 ntBASIC3.72□□□□□ -1.81
DDX11Q96FC9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
DDX11Q96FC9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX11Q96FC9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.71□□□□□ -1.81
DDX11Q96FC9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
DDX11Q96FC9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX11Q96FC9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
DDX11Q96FC9 RNU6-942P-201ENST00000363002 107 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 RNU4-9P-201ENST00000364951 139 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 RNU6-746P-201ENST00000384112 109 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 RNU6-102P-201ENST00000384485 104 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 SNORA19-201ENST00000384737 128 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 SNORD78.2-201ENST00000391076 69 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 BTF3L4P2-201ENST00000392798 346 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 MIR1298-201ENST00000408783 112 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX11Q96FC9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX11Q96FC9 RNU6-496P-201ENST00000516145 99 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 EIF4BP1-201ENST00000554881 351 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX11Q96FC9 MIR4782-201ENST00000577987 79 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 MIR3609-201ENST00000582661 80 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 AL137843.1-201ENST00000605078 385 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 uc_338.25-201ENST00000613756 156 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 SCARNA4-201ENST00000629045 128 ntBASIC3.71□□□□□ -1.82
DDX11Q96FC9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.71□□□□□ -1.82
DDX11Q96FC9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.71□□□□□ -1.82
DDX11Q96FC9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX11Q96FC9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX11Q96FC9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.7□□□□□ -1.82
DDX11Q96FC9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX11Q96FC9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX11Q96FC9 RNU6-898P-201ENST00000365627 104 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 RNU6-17P-201ENST00000384245 107 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 Y_RNA.464-201ENST00000384282 110 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 RNU6-18P-201ENST00000384527 107 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 RNU1-101P-201ENST00000391171 127 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 AL591043.1-201ENST00000432461 424 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 AC009969.1-201ENST00000438726 172 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 AC098831.1-201ENST00000440661 216 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 AC006445.2-201ENST00000510061 472 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 MIR4659A-201ENST00000580269 81 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 U2.14-201ENST00000615943 113 ntBASIC3.7□□□□□ -1.82
DDX11Q96FC9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
DDX11Q96FC9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
DDX11Q96FC9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX11Q96FC9 RNU6-778P-201ENST00000363269 103 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 SNORD113-8-201ENST00000363497 74 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 SNORD63-201ENST00000384262 68 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 RNU6-937P-201ENST00000384325 106 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 U3.37-201ENST00000408528 213 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 RPL32P35-201ENST00000415214 394 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX11Q96FC9 AL445305.1-201ENST00000432577 575 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 RPS26P21-201ENST00000475397 348 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 RPL23AP75-201ENST00000491601 451 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AF186996.7-201ENST00000492781 209 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX11Q96FC9 SERF1AP1-201ENST00000514575 187 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 RNU6-1212P-201ENST00000517023 104 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DDX11Q96FC9 CBX3P4-201ENST00000538909 354 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC020895.1-201ENST00000595362 272 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC127459.3-201ENST00000624328 466 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC233981.2-201ENST00000611524 1614 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 AC093010.3-201ENST00000570269 15214 ntBASIC3.69□□□□□ -1.82
DDX11Q96FC9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX11Q96FC9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX11Q96FC9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
DDX11Q96FC9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
DDX11Q96FC9 Y_RNA.83-201ENST00000363005 113 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 RNU6-774P-201ENST00000363238 107 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 RNU1-140P-201ENST00000365040 165 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms