Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 RNU6-142P-201ENST00000384019 107 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 RNU6-301P-201ENST00000384277 107 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 MIR29B2-201ENST00000385055 81 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 MIR221-201ENST00000385135 110 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 SNORA12-201ENST00000391162 147 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 MIR548K-201ENST00000408406 116 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 RN7SKP32-201ENST00000410167 303 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 HMGN2P38-201ENST00000423806 265 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 IFNA11P-201ENST00000446352 526 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 FTH1P25-201ENST00000447665 469 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AC145146.1-201ENST00000496370 254 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AC021146.2-201ENST00000504736 556 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AC103851.1-201ENST00000506833 274 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 Z98751.3-201ENST00000604447 521 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 AC124303.1-201ENST00000605703 360 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 MIR6128-201ENST00000615528 109 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.47□□□□□ -2.01
SMARCE1Q969G3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.47□□□□□ -2.01
SMARCE1Q969G3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SMARCE1Q969G3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SMARCE1Q969G3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SMARCE1Q969G3 SNORD50.1-201ENST00000362987 71 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 RNU6-1059P-201ENST00000363752 98 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 SNORA38-201ENST00000363946 132 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 SNORD81.2-201ENST00000365153 76 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 Y_RNA.339-201ENST00000365325 102 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 HMGB1P18-201ENST00000438801 619 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 DAP3P1-201ENST00000441522 278 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC090255.1-201ENST00000495779 349 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC005741.1-201ENST00000511094 432 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 RNA5SP281-201ENST00000516504 135 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC118273.2-201ENST00000532092 465 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC021231.3-201ENST00000558497 370 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 POLR3GP2-201ENST00000588366 668 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.46□□□□□ -2.02
SMARCE1Q969G3 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 U4atac.1-201ENST00000618345 95 ntBASIC2.46□□□□□ -2.02
SMARCE1Q969G3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SMARCE1Q969G3 Y_RNA.166-201ENST00000363730 102 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 SNORA29-201ENST00000384183 140 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 RNU6-784P-201ENST00000384330 106 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SMARCE1Q969G3 SNORA46.1-201ENST00000391069 153 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 RNA5SP201-201ENST00000410316 124 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCE1Q969G3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.45□□□□□ -2.02
SMARCE1Q969G3 AL139396.1-201ENST00000421137 167 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 RPS3AP52-201ENST00000435639 297 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 AC098614.3-201ENST00000438957 440 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 snoU13.6-201ENST00000458785 104 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 AC005730.3-201ENST00000583067 366 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 MIR4448-201ENST00000584360 86 ntBASIC2.45□□□□□ -2.02
SMARCE1Q969G3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SMARCE1Q969G3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SMARCE1Q969G3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SMARCE1Q969G3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCE1Q969G3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.44□□□□□ -2.02
SMARCE1Q969G3 RNU5B-2P-201ENST00000363036 113 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 SNORA72.1-201ENST00000363485 129 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 Y_RNA.473-201ENST00000384333 102 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 RNU1-148P-201ENST00000384472 162 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 MTCYBP2-201ENST00000407745 171 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 RNU2-48P-201ENST00000410694 191 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 USP9YP30-201ENST00000430729 455 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AL353572.1-201ENST00000442490 417 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AC079354.2-201ENST00000453523 154 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 RNU6-717P-201ENST00000459076 104 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AP001486.1-201ENST00000463339 476 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 RNU6-965P-201ENST00000516721 96 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AP001094.1-201ENST00000579805 193 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 FGF7P1-201ENST00000582820 288 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 MIR6840-201ENST00000611937 71 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AL355073.2-201ENST00000612106 557 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 AC243829.7-201ENST00000633081 225 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.44□□□□□ -2.02
SMARCE1Q969G3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMARCE1Q969G3 AL596028.1-201ENST00000326971 197 ntBASIC2.43□□□□□ -2.02
SMARCE1Q969G3 RNA5SP289-201ENST00000362332 137 ntBASIC2.43□□□□□ -2.02
SMARCE1Q969G3 Y_RNA.88-201ENST00000363029 99 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms