Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC090096.1-201ENST00000489168 390 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 Y_RNA.675-201ENST00000516389 149 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 HSPE1P4-201ENST00000550617 308 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 MIR5696-201ENST00000578474 85 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 MIR3199-1-201ENST00000582434 88 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 MIR3136-201ENST00000583498 78 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 AC009229.3-201ENST00000608056 282 ntBASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC44A1Q8WWI5 RNU6-212P-201ENST00000362642 104 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-1286P-201ENST00000383871 107 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-142P-201ENST00000384019 107 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 MIR518C-201ENST00000384822 101 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 RNY4P36-201ENST00000391116 96 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 CBX3P9-201ENST00000402326 552 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 USMG5P1-201ENST00000425964 177 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 Z82205.1-201ENST00000428456 297 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 RPL30P4-201ENST00000429309 333 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC104564.1-201ENST00000493028 407 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC023141.11-201ENST00000508864 202 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 RNU2-53P-201ENST00000516257 147 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.718-201ENST00000517110 102 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC021231.3-201ENST00000558497 370 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AC005899.2-201ENST00000584353 90 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 PISRT1.1-201ENST00000616930 107 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AL669831.3-213ENST00000636676 183 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 AL450472.1-202ENST00000637286 180 ntBASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.4□□□□□ -2.03
SLC44A1Q8WWI5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 MTND4P27-201ENST00000450813 1354 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 MTND5P9-201ENST00000503854 1755 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.67-201ENST00000362870 100 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 RNU1-72P-201ENST00000362976 153 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 MTCO2P27-201ENST00000420740 428 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 MTND4P28-201ENST00000426217 387 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AL513124.1-201ENST00000450410 614 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 ELOCP24-201ENST00000456370 334 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AC107222.1-201ENST00000510899 637 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AC008549.1-201ENST00000512900 643 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 RNU5F-2P-201ENST00000516066 82 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-307P-201ENST00000516743 106 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AC069294.1-201ENST00000608397 350 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 AC092608.2-201ENST00000624427 218 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 MIR1291-201ENST00000627649 87 ntBASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
SLC44A1Q8WWI5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.259-201ENST00000364619 101 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.404-201ENST00000383978 102 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 RNU6-968P-201ENST00000384076 107 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.535-201ENST00000384612 99 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AC243428.1-201ENST00000421099 264 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AF228730.4-201ENST00000421457 183 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 RNU7-26P-201ENST00000458980 63 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.653-201ENST00000459091 95 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 RPL7P42-201ENST00000481005 679 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 HMGB1P35-201ENST00000503360 598 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AC097473.1-201ENST00000508142 408 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AC005741.1-201ENST00000511094 432 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 MIR4273-201ENST00000582824 84 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 AC133104.2-201ENST00000615272 193 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 IGHVIII-44-202ENST00000636235 289 ntBASIC2.38□□□□□ -2.03
SLC44A1Q8WWI5 SNORD98-201ENST00000636377 67 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms