Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 HSFY7P-201ENST00000432672 318 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 GPR143P-201ENST00000434155 205 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC002486.1-201ENST00000435098 391 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 HSFY8P-201ENST00000437934 318 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC069257.2-201ENST00000441819 155 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AL022238.1-201ENST00000442557 355 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 EPS15P1-201ENST00000448836 336 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC013470.1-201ENST00000453438 462 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 HSFY5P-201ENST00000453726 309 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 TOMM22P6-201ENST00000465035 409 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC108078.1-201ENST00000508073 725 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 MTCO3P7-201ENST00000510008 774 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 FABP5P5-201ENST00000515537 406 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC019176.1-201ENST00000518519 225 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 RAB11AP2-201ENST00000545905 639 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 EIF4A1P12-201ENST00000551910 141 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 BNIP3P8-201ENST00000597863 560 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 AC008945.2-201ENST00000606056 604 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 MTND5P35-201ENST00000557537 1720 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNU1-22P-201ENST00000363334 158 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNU6-1214P-201ENST00000363650 109 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 SNORD32A-201ENST00000364805 84 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNU6-1303P-201ENST00000364841 107 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 MIR454-201ENST00000390180 115 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RPS29P13-201ENST00000402041 169 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 MRPL35P1-201ENST00000404272 572 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNU4-46P-201ENST00000410818 138 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 SNRPEP10-201ENST00000420249 274 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 CST2P1-201ENST00000425770 87 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AL133396.1-201ENST00000432048 687 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 MTCO3P29-201ENST00000432119 779 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC245047.4-201ENST00000433189 144 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AL596276.1-201ENST00000434465 418 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 GTF2IP13-201ENST00000438487 386 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC016925.1-201ENST00000458303 298 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 snoU13.30-201ENST00000458951 104 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNU7-182P-201ENST00000459009 62 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 MTCO3P28-201ENST00000513351 515 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 LRRC34P2-201ENST00000514850 553 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNU6-1098P-201ENST00000516772 96 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNA5SP503-201ENST00000517047 117 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNA5SP437-201ENST00000517249 129 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 ZNF321P-202ENST00000550843 495 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 MIR4295-201ENST00000585286 85 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC004223.4-201ENST00000612426 332 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 AC091895.1-201ENST00000624494 256 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 SEPT14P19-203ENST00000633205 211 ntBASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
ZIC4Q8N9L1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 RNU6-862P-201ENST00000362804 105 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 RNU6-552P-201ENST00000362869 119 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 Y_RNA.132-201ENST00000363421 102 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 RNU1-96P-201ENST00000364163 162 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 RNY4P34-201ENST00000364779 95 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 MIR548B-201ENST00000385247 97 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 SNORA12.2-201ENST00000391040 156 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 MIR1285-1-201ENST00000408593 84 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AP000275.1-201ENST00000411943 390 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 EIF1P1-201ENST00000421436 341 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 SNAP23P1-201ENST00000433229 246 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC099677.2-201ENST00000436385 175 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC244505.5-201ENST00000443639 207 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 OR2AQ1P-201ENST00000451972 200 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 HMGN1P7-201ENST00000491722 313 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AP003072.2-201ENST00000527756 676 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 CYP4A27P-201ENST00000567218 190 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC078795.3-201ENST00000602913 472 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AL022161.1-201ENST00000604390 213 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 uc_338.11-201ENST00000619132 160 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 AC022418.1-201ENST00000624118 445 ntBASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
ZIC4Q8N9L1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 SNORA63D-201ENST00000364359 132 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 MIR618-201ENST00000385287 98 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 RPL37P10-201ENST00000412884 288 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AL161935.2-201ENST00000414627 60 ntBASIC0.93□□□□□ -2.26
ZIC4Q8N9L1 AL117339.3-201ENST00000418733 162 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms