Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3□□□□□ -1.93
KRT78Q8N1N4 RPL7P49-201ENST00000471402 708 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 HMGB1P35-201ENST00000503360 598 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3□□□□□ -1.93
KRT78Q8N1N4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3□□□□□ -1.93
KRT78Q8N1N4 MIR3944-201ENST00000581277 108 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 AC060766.3-201ENST00000591442 263 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 AC009318.2-201ENST00000610917 651 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 AL449363.1-201ENST00000617815 186 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 RNU6-490P-201ENST00000362985 107 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.447-201ENST00000384184 113 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 SNORA7.4-201ENST00000384249 137 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 RNA5SP171-201ENST00000391071 115 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 CYP2C59P-201ENST00000457790 269 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 SNORA31.16-201ENST00000516773 139 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 MIR3923-201ENST00000579521 83 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 AC092447.9-201ENST00000603395 144 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 MIR92B-201ENST00000607575 96 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 MIR7112-201ENST00000616126 65 ntBASIC2.99□□□□□ -1.93
KRT78Q8N1N4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
KRT78Q8N1N4 AL353743.1-202ENST00000431724 1695 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 ZNF299P-201ENST00000406845 1804 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SNORA63.1-201ENST00000362493 131 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SNORD50.1-201ENST00000362987 71 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SNORA38.1-201ENST00000364172 131 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.428-201ENST00000384078 102 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 RNU6-823P-201ENST00000391042 103 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 MIR887-201ENST00000401258 79 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 ARL5AP4-201ENST00000430731 512 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 AC244505.4-201ENST00000434905 287 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT78Q8N1N4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SSXP5-201ENST00000443473 287 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 AC022493.2-201ENST00000506122 481 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SLC25A15P5-201ENST00000508033 253 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SCARNA16.2-201ENST00000516520 172 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 RNA5SP384-201ENST00000516615 116 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SNORD116.3-201ENST00000517176 78 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 AC245166.1-201ENST00000521012 253 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 MRPS36P4-201ENST00000534436 298 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 AC016727.2-201ENST00000603988 621 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 SNORA43.4-201ENST00000629559 138 ntBASIC2.98□□□□□ -1.93
KRT78Q8N1N4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT78Q8N1N4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KRT78Q8N1N4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KRT78Q8N1N4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 SNORA29-201ENST00000384183 140 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 SNORA36A-201ENST00000384221 132 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 MIR29B2-201ENST00000385055 81 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 RNU6-101P-201ENST00000410323 104 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 BMS1P22-201ENST00000414726 313 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 RPL21P2-201ENST00000440049 481 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 DYNLT3P2-201ENST00000442517 295 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 RPS3P1-201ENST00000456781 192 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 RNY3P15-201ENST00000516297 97 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.680-201ENST00000516441 93 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 RN7SKP40-201ENST00000517211 242 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 RNU6-586P-201ENST00000517265 104 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 AC007536.1-201ENST00000533382 349 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 GNAI2P1-201ENST00000541815 315 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 AC090616.3-201ENST00000582184 217 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 UBL5P2-201ENST00000583788 219 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 Z98751.3-201ENST00000604447 521 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 AC137590.2-201ENST00000619709 240 ntBASIC2.97□□□□□ -1.93
KRT78Q8N1N4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.97□□□□□ -1.93
KRT78Q8N1N4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.96□□□□□ -1.93
KRT78Q8N1N4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
KRT78Q8N1N4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
KRT78Q8N1N4 Y_RNA.210-201ENST00000364161 110 ntBASIC2.96□□□□□ -1.94
KRT78Q8N1N4 RNU4-9P-201ENST00000364951 139 ntBASIC2.96□□□□□ -1.94
KRT78Q8N1N4 SNORA51.4-201ENST00000364993 124 ntBASIC2.96□□□□□ -1.94
KRT78Q8N1N4 RNA5SP240-201ENST00000365355 128 ntBASIC2.96□□□□□ -1.94
KRT78Q8N1N4 SNORA46-201ENST00000384762 135 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms