Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC034114.1-201ENST00000520293 285 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AC100830.2-201ENST00000581636 240 ntBASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
C9orf40Q8IXQ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.13
C9orf40Q8IXQ3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC092268.1-201ENST00000342691 405 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 RNU4-15P-201ENST00000362613 141 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 RNU4-56P-201ENST00000364700 142 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-142P-201ENST00000384019 107 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 RNA5SP270-201ENST00000411361 118 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 FCF1P9-201ENST00000412546 282 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 EDDM3CP-201ENST00000415977 425 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC007547.1-201ENST00000462177 490 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 RPS27P21-201ENST00000486977 252 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC011352.1-201ENST00000512300 793 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC025465.4-201ENST00000513422 638 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-667P-201ENST00000517186 102 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC022616.8-201ENST00000533569 253 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC018630.3-201ENST00000542637 96 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AC026371.1-201ENST00000551867 419 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 SCOCP1-201ENST00000554676 349 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 AL161423.1-201ENST00000613700 262 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 MIR3662-201ENST00000637030 95 ntBASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
C9orf40Q8IXQ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC009541.1-201ENST00000438279 2662 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 Y_RNA.100-201ENST00000363141 102 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-128P-201ENST00000383976 107 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 SNORA26.3-201ENST00000391119 136 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC019129.1-201ENST00000403786 261 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 RNA5SP118-201ENST00000410385 109 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 VN1R36P-201ENST00000414936 291 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 MTND3P9-201ENST00000429526 346 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 IPO7P1-201ENST00000442031 636 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 GPM6BP3-201ENST00000442797 145 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC145146.1-201ENST00000496370 254 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 TRBVA-201ENST00000498804 316 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 MTCYBP18-201ENST00000501056 747 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 FAM206BP-201ENST00000510179 541 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-965P-201ENST00000516721 96 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 RNU7-193P-201ENST00000516723 65 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 ANP32BP3-201ENST00000559213 706 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC110588.1-201ENST00000559699 137 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AL158827.2-201ENST00000602494 330 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC080078.2-201ENST00000603766 501 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC022202.1-201ENST00000613515 211 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AC090617.10-201ENST00000624308 134 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 AL691447.3-201ENST00000635020 330 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
C9orf40Q8IXQ3 CENPCP1-201ENST00000533085 2578 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-227P-201ENST00000362865 103 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AL355497.1-201ENST00000406262 551 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 RNU2-48P-201ENST00000410694 191 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-325P-201ENST00000411132 105 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AL030996.1-201ENST00000411430 235 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 EIF1P1-201ENST00000421436 341 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 CBX3P6-201ENST00000430257 527 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 MTND1P4-201ENST00000435196 415 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 IFNA20P-201ENST00000436840 528 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 MTCO3P18-201ENST00000440206 761 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 RNU7-66P-201ENST00000459469 62 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 RPS29P27-201ENST00000463711 170 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AC104564.1-201ENST00000493028 407 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AC082651.2-201ENST00000496833 166 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AC233702.2-202ENST00000562547 291 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AC078795.3-201ENST00000602913 472 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms