Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 AC069528.2-201ENST00000624849 1991 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 RNA5SP361-201ENST00000362686 118 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 RNU6-326P-201ENST00000365480 107 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 RNY1P5-201ENST00000383890 115 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 CYCSP4-201ENST00000429682 331 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 AC091021.1-201ENST00000468051 388 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 RPL27AP5-201ENST00000469428 449 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 COX6CP14-201ENST00000469580 174 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 RPL31P61-201ENST00000496160 376 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 EIF4A1P12-201ENST00000551910 141 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 AC008739.2-201ENST00000597006 317 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 AC011921.3-201ENST00000605540 361 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 AC104465.1-201ENST00000611365 139 ntBASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS4Q8IUM7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 Y_RNA.179-201ENST00000363844 90 ntBASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 MIR29B2-201ENST00000385055 81 ntBASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 AC069240.1-201ENST00000548774 375 ntBASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 SNORD113-5-201ENST00000607261 78 ntBASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 PCGEM1.1-201ENST00000613431 131 ntBASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 AC135776.4-201ENST00000624300 1904 ntBASIC4.03□□□□□ -1.76
NPAS4Q8IUM7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.383-201ENST00000383855 97 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 RNU6-793P-201ENST00000384233 104 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.569-201ENST00000384749 103 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 MIR487A-201ENST00000385009 80 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 MIR329-1-201ENST00000385028 80 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AL512633.1-201ENST00000399931 655 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.590-201ENST00000410140 107 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AL160275.2-201ENST00000412010 394 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AL390729.2-201ENST00000416137 156 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AC007395.1-201ENST00000451333 677 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AC006445.1-201ENST00000491925 405 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AC145146.1-201ENST00000496370 254 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.679-201ENST00000516416 91 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 MIR3144-201ENST00000579460 79 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AC011471.1-201ENST00000585766 187 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AP003122.5-201ENST00000527668 3766 ntBASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
NPAS4Q8IUM7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNA5SP50-201ENST00000363731 107 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNA5SP267-201ENST00000364893 126 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 SNORA18.3-201ENST00000384122 132 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNA5SP424-201ENST00000390988 115 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNA5SP201-201ENST00000410316 124 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNU5A-5P-201ENST00000411054 116 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 EIF4EP4-201ENST00000424916 578 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNU7-170P-201ENST00000459303 61 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RPL31P41-201ENST00000477967 372 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNA5SP208-201ENST00000516156 78 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 RNY3P16-201ENST00000516338 101 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AL137849.1-201ENST00000604767 169 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AC037487.3-201ENST00000606668 112 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AL365265.1-201ENST00000621045 234 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 MIR7157-201ENST00000635801 60 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 U6.106-201ENST00000636360 105 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 AL079305.1-201ENST00000623159 3008 ntBASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NPAS4Q8IUM7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
NPAS4Q8IUM7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4□□□□□ -1.77
NPAS4Q8IUM7 SNORD9-201ENST00000362566 104 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RNU1-62P-201ENST00000362599 164 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.233-201ENST00000364407 101 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RNU6-923P-201ENST00000364753 107 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 Y_RNA.418-201ENST00000384029 102 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RNU6-1145P-201ENST00000384246 107 ntBASIC4□□□□□ -1.77
NPAS4Q8IUM7 RNU6-1081P-201ENST00000384537 107 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms