Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 AC018865.2-201ENST00000423631 129 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AIMP1P2-201ENST00000425294 312 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 MICF-203ENST00000432679 129 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 RPS3AP12-201ENST00000443616 753 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 SNORD109B-201ENST00000458961 67 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 SNORD109A-201ENST00000459128 67 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 Y_RNA.631-201ENST00000459607 101 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AC016632.1-201ENST00000503994 196 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 RNU6-976P-201ENST00000516086 111 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 SNRPGP18-201ENST00000553000 214 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 SUB1P3-201ENST00000564581 315 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AC007336.1-201ENST00000576365 3828 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 MIR5571-201ENST00000577998 113 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 MIR3171-201ENST00000584270 74 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 MIR7157-201ENST00000635801 60 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AC233981.2-201ENST00000611524 1614 ntBASIC2.5□□□□□ -2.01
ZC3HC1Q86WB0 AC080128.1-201ENST00000474389 1917 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNU6-212P-201ENST00000362642 104 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNU5B-2P-201ENST00000363036 113 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNA5SP456-201ENST00000364002 114 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNU6-99P-201ENST00000364721 107 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 U3.13-201ENST00000364804 214 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 SNORA70.4-201ENST00000365509 134 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNU6-968P-201ENST00000384076 107 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 Y_RNA.445-201ENST00000384168 102 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 SNORA29-201ENST00000384183 140 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 Y_RNA.496-201ENST00000384444 101 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNU6-308P-201ENST00000390957 107 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AL358453.1-201ENST00000422522 250 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 PMCHL1-202ENST00000423102 261 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AL445687.1-201ENST00000439946 251 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 GPM6BP3-201ENST00000442797 145 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RPL23AP75-201ENST00000491601 451 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AF186996.7-201ENST00000492781 209 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 SLC25A15P5-201ENST00000508033 253 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNU5F-2P-201ENST00000516066 82 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 RNU6-264P-201ENST00000517134 104 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AC007375.1-201ENST00000554513 578 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 MIR3117-201ENST00000584034 78 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 MIR4765-201ENST00000585007 77 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AL078605.1-201ENST00000603529 500 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AL033523.1-201ENST00000605153 153 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AC007742.2-201ENST00000618226 398 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AC091925.1-201ENST00000623204 462 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 Z75746.1-201ENST00000440243 2080 ntBASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.49□□□□□ -2.01
ZC3HC1Q86WB0 AP000560.1-201ENST00000624150 1937 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AC092268.1-201ENST00000342691 405 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 Y_RNA.252-201ENST00000364556 101 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 MIR491-201ENST00000384877 84 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 RNA5SP494-201ENST00000410653 129 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 RNU2-52P-201ENST00000410680 190 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 MRPS18CP6-201ENST00000423587 223 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AC008267.5-201ENST00000424928 265 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 Z82188.1-201ENST00000436709 154 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 snoU13.22-201ENST00000459428 104 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 RPL30P10-201ENST00000488148 337 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AIG1P1-201ENST00000503376 148 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 RNA5SP112-201ENST00000515937 99 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 SNORA31.16-201ENST00000516773 139 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AC115990.1-201ENST00000526957 301 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AC016256.1-201ENST00000547971 354 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AC010928.2-201ENST00000588017 287 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AC073410.2-201ENST00000603240 332 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AL356280.1-201ENST00000603614 379 ntBASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
ZC3HC1Q86WB0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 Y_RNA.216-201ENST00000364205 93 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 RNA5SP387-201ENST00000364226 106 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 RNU6-142P-201ENST00000384019 107 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 RNU1-57P-201ENST00000384491 166 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 Y_RNA.577-201ENST00000384794 101 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 AL590135.1-201ENST00000422215 156 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 AC019205.3-201ENST00000424573 156 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 AC016700.2-201ENST00000446011 156 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 AL353705.4-201ENST00000449661 238 ntBASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.47□□□□□ -2.01
ZC3HC1Q86WB0 AL121594.1-201ENST00000475906 575 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms