Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 Y_RNA.682-201ENST00000516457 100 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB1Q86U70 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.27□□□□□ -2.05
LDB1Q86U70 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB1Q86U70 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB1Q86U70 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 MIR6895-201ENST00000613497 78 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.27□□□□□ -2.05
LDB1Q86U70 MIR6766-201ENST00000622641 72 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 DUXAP9-208ENST00000622815 614 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AC099654.14-201ENST00000638599 341 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 Z82209.1-201ENST00000422141 2135 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LDB1Q86U70 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LDB1Q86U70 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LDB1Q86U70 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.26□□□□□ -2.05
LDB1Q86U70 RNU6-845P-201ENST00000362578 103 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 RNU6-968P-201ENST00000384076 107 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 SNORA29-201ENST00000384183 140 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 SNORA36A-201ENST00000384221 132 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 SNORA46.1-201ENST00000391069 153 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 RNA5SP201-201ENST00000410316 124 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
LDB1Q86U70 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.26□□□□□ -2.05
LDB1Q86U70 AL139109.1-201ENST00000455491 297 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.26□□□□□ -2.05
LDB1Q86U70 ACA59.1-201ENST00000515966 143 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 SNORA31.11-201ENST00000516528 139 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 RNA5SP82-201ENST00000516707 92 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 AC022616.8-201ENST00000533569 253 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.26□□□□□ -2.05
LDB1Q86U70 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.26□□□□□ -2.05
LDB1Q86U70 MIR5007-201ENST00000583098 95 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 AL133216.2-202ENST00000634512 349 ntBASIC2.26□□□□□ -2.05
LDB1Q86U70 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LDB1Q86U70 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB1Q86U70 RNU1-91P-201ENST00000364746 163 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB1Q86U70 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB1Q86U70 Z82205.1-201ENST00000428456 297 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB1Q86U70 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.25□□□□□ -2.05
LDB1Q86U70 PMCHL2-203ENST00000457791 237 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 AC021146.2-201ENST00000504736 556 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 RNU7-30P-201ENST00000516835 62 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 RNU1-54P-201ENST00000517181 120 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 AC034114.1-201ENST00000520293 285 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 AC118273.2-201ENST00000532092 465 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 AC005668.1-201ENST00000571142 476 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 PCGEM1.1-201ENST00000613431 131 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 AC005520.5-201ENST00000613926 164 ntBASIC2.25□□□□□ -2.05
LDB1Q86U70 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.25□□□□□ -2.05
LDB1Q86U70 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LDB1Q86U70 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.24□□□□□ -2.05
LDB1Q86U70 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LDB1Q86U70 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB1Q86U70 Y_RNA.166-201ENST00000363730 102 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 U3.9-201ENST00000363823 204 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 SNORD32B-201ENST00000364460 84 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 MIR221-201ENST00000385135 110 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 MIR1294-201ENST00000408503 142 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 AC138393.2-201ENST00000414742 246 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 AL513124.1-201ENST00000450410 614 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 MTND5P5-201ENST00000503764 376 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 RNA5SP24-201ENST00000516478 95 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 NDUFA5P6-201ENST00000542110 379 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 MIR3126-201ENST00000577443 74 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 MIR4435-1-201ENST00000582552 80 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 MIR4801-201ENST00000582704 82 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
LDB1Q86U70 SNORD14A-201ENST00000606526 91 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.24□□□□□ -2.05
LDB1Q86U70 AC022306.2-201ENST00000617563 647 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB1Q86U70 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB1Q86U70 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDB1Q86U70 AC233981.2-201ENST00000611524 1614 ntBASIC2.24□□□□□ -2.05
LDB1Q86U70 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LDB1Q86U70 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LDB1Q86U70 RNU5B-2P-201ENST00000363036 113 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 RNU6-611P-201ENST00000384276 104 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 SNORA12-201ENST00000391162 147 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 MIR548K-201ENST00000408406 116 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 RNA5SP494-201ENST00000410653 129 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 RNU2-48P-201ENST00000410694 191 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 AC074085.1-201ENST00000413598 418 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 AC132942.1-201ENST00000486753 483 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 AC116353.2-201ENST00000505332 712 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 AC116337.1-201ENST00000509680 687 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 SNORA4.4-201ENST00000515921 135 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 SNORA20.3-201ENST00000516880 132 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 RNU6-667P-201ENST00000517186 102 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 HSPE1P18-201ENST00000517602 280 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 MRPS36P4-201ENST00000534436 298 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 MIR6128-201ENST00000615528 109 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.23□□□□□ -2.05
LDB1Q86U70 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms