Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MIR3136-201ENST00000583498 78 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 AL008718.3-201ENST00000610217 321 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 MIR3674-201ENST00000636576 68 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF111Q6ZNA4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 RNU6-1272P-201ENST00000362776 107 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 SNORA18.3-201ENST00000384122 132 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 CBX3P9-201ENST00000402326 552 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 RNU2-54P-201ENST00000410299 190 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 RN7SKP156-201ENST00000410308 342 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 RNA5SP475-201ENST00000410568 110 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 PTGES3P4-201ENST00000426243 356 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 TGIF1P1-201ENST00000558095 802 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 MIR5692C2-201ENST00000577959 77 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 AC087499.8-201ENST00000578406 226 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 MIR3923-201ENST00000579521 83 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 AL356575.1-201ENST00000603008 283 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 AP001485.1-201ENST00000604799 199 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF111Q6ZNA4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 RNU1-62P-201ENST00000362599 164 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 Y_RNA.415-201ENST00000384012 112 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 SNORA1.3-201ENST00000384676 136 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 RNU6-19P-201ENST00000384718 107 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 Y_RNA.571-201ENST00000384753 98 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 MIR320B2-201ENST00000408479 138 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 RNU5E-9P-201ENST00000411164 104 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AC009963.1-201ENST00000417265 157 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AC017083.1-201ENST00000428093 483 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 RPS4XP2-201ENST00000458402 793 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 RNU6-107P-201ENST00000516643 102 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AC091152.3-201ENST00000604227 325 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 SNRPGP20-201ENST00000604477 205 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AC108706.1-201ENST00000611053 297 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 AP001486.2-201ENST00000561652 5113 ntBASIC3.53□□□□□ -1.84
RNF111Q6ZNA4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.53□□□□□ -1.85
RNF111Q6ZNA4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.53□□□□□ -1.85
RNF111Q6ZNA4 RNU6-529P-201ENST00000363383 104 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 RNU6-1130P-201ENST00000365434 107 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 SNORD50.2-201ENST00000365465 70 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 SNORD116-18-201ENST00000383961 92 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.441-201ENST00000384123 112 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 RNU2-49P-201ENST00000410666 184 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AL451074.5-201ENST00000415894 435 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AL139247.1-201ENST00000422768 325 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 SCARNA14-201ENST00000516903 136 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AL034555.1-201ENST00000604816 211 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 AC005520.5-201ENST00000613926 164 ntBASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RNF111Q6ZNA4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 RNU6-324P-201ENST00000363957 106 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 RN7SKP202-201ENST00000410439 330 ntBASIC3.51□□□□□ -1.85
RNF111Q6ZNA4 CYCSP19-201ENST00000411715 316 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms