Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC091953.5-201ENST00000622919 233 ntBASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PPP4R4Q6NUP7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-17P-201ENST00000384245 107 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-18P-201ENST00000384527 107 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 MIR208B-201ENST00000401172 77 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 HMGN2P35-201ENST00000412164 270 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 ARL5AP4-201ENST00000430731 512 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 RPS29P6-201ENST00000438196 145 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 MIR2053-201ENST00000459295 91 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 RPL17P19-201ENST00000489069 552 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-470P-201ENST00000515954 104 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 SNORA74D-201ENST00000516404 141 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 DEFB131C-201ENST00000528817 165 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 AP002404.1-201ENST00000532005 451 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 AC027288.2-201ENST00000553028 243 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 AC073657.2-201ENST00000605661 303 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 AL160413.1-201ENST00000622780 310 ntBASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PPP4R4Q6NUP7 SNORD42.2-201ENST00000365570 69 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-611P-201ENST00000384276 104 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 MIR32-201ENST00000384965 70 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 MIR549A-201ENST00000385268 96 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 SNORD88.1-201ENST00000408684 91 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 MRPS18CP6-201ENST00000423587 223 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 RN7SKP210-201ENST00000459176 261 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 RN7SL633P-201ENST00000488974 297 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 RNU6-307P-201ENST00000516743 106 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 SUB1P3-201ENST00000564581 315 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 MIR4446-201ENST00000578505 67 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 MIR5194-201ENST00000582634 120 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 AC016727.2-201ENST00000603988 621 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 AL355802.3-201ENST00000607571 545 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 MIR7112-201ENST00000616126 65 ntBASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PPP4R4Q6NUP7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
PPP4R4Q6NUP7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 RNA5SP393-201ENST00000363423 117 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.813-201ENST00000364639 102 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AL590004.2-201ENST00000404787 371 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 SUMO1P4-201ENST00000429430 302 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AL139109.1-201ENST00000455491 297 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 RN7SL863P-201ENST00000462370 296 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 TOMM22P6-201ENST00000465035 409 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 RN7SL504P-201ENST00000494496 287 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-667P-201ENST00000517186 102 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AC080078.3-201ENST00000605407 463 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 RMST_6.1-201ENST00000611980 203 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 uc_338.25-201ENST00000613756 156 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AL162274.2-201ENST00000614406 332 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AC245884.12-201ENST00000615364 59 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 MTND5P10-201ENST00000603719 1809 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 AC073544.1-201ENST00000600110 1595 ntBASIC2.9□□□□□ -1.95
PPP4R4Q6NUP7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 U3.9-201ENST00000363823 204 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 SNORA3A-201ENST00000364113 130 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 RNU6-99P-201ENST00000364721 107 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 Y_RNA.460-201ENST00000384255 102 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 MIR592-201ENST00000384959 97 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AL138885.1-201ENST00000405921 675 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 MIR1294-201ENST00000408503 142 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AL451074.5-201ENST00000415894 435 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AC022018.1-201ENST00000430685 241 ntBASIC2.89□□□□□ -1.95
PPP4R4Q6NUP7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms