Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 SUB1P3-201ENST00000564581 315 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 AC100812.1-201ENST00000607622 580 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 MIR1244-1-201ENST00000612829 85 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 AL160413.1-201ENST00000622780 310 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 MIR1244-3-201ENST00000635744 85 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 MIR1244-2-201ENST00000636449 85 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 MIR1244-4-202ENST00000636813 85 ntBASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
ATPAF1Q5TC12 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 RNU6-874P-201ENST00000362390 105 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 MIR561-201ENST00000385216 97 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 MIR1294-201ENST00000408503 142 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 RNA5SP274-201ENST00000410484 108 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 MTCYBP10-201ENST00000424905 650 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AC092423.1-201ENST00000430165 186 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 CBX3P6-201ENST00000430257 527 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 RN7SL633P-201ENST00000488974 297 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 Y_RNA.706-201ENST00000516933 99 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 RNU6-699P-201ENST00000517081 110 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AC090517.1-201ENST00000569307 266 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AC004584.2-201ENST00000570407 410 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AC096577.2-201ENST00000611455 153 ntBASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ATPAF1Q5TC12 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 RNU6-490P-201ENST00000362985 107 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 Y_RNA.106-201ENST00000363189 100 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 Y_RNA.813-201ENST00000364639 102 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 Y_RNA.319-201ENST00000365138 92 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 Y_RNA.463-201ENST00000384271 102 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 MIR190B-201ENST00000401119 79 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 RPS20P15-201ENST00000412792 311 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 MRPS18CP6-201ENST00000423587 223 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 MTND4P28-201ENST00000426217 387 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 AC027124.2-201ENST00000428249 105 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 AL445305.1-201ENST00000432577 575 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 RN7SL20P-201ENST00000488827 297 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 RN7SL504P-201ENST00000494496 287 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 AC105758.1-201ENST00000506038 399 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 RNU6-58P-201ENST00000517143 103 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 AC018630.3-201ENST00000542637 96 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 AC027288.2-201ENST00000553028 243 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 MIR5195-201ENST00000583555 115 ntBASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATPAF1Q5TC12 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AC073544.1-201ENST00000600110 1595 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 MIR369-201ENST00000362155 70 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RNU6-26P-201ENST00000383985 107 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RNU6-541P-201ENST00000384709 110 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 Y_RNA.577-201ENST00000384794 101 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RNU6-1156P-201ENST00000410365 100 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RNU2-48P-201ENST00000410694 191 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AC007064.1-201ENST00000412238 351 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AL451074.5-201ENST00000415894 435 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AC007098.1-201ENST00000420122 367 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AL035666.1-201ENST00000446195 348 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 BX510359.1-201ENST00000456973 237 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RNU7-87P-201ENST00000459343 62 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AC007215.1-201ENST00000464893 276 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AP000870.1-201ENST00000472927 406 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AC107032.1-201ENST00000485945 480 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RNU6-1170P-201ENST00000515974 106 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 UBL5P2-201ENST00000583788 219 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 AL080274.1-201ENST00000605565 220 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 MIR1248-201ENST00000629190 106 ntBASIC2.59□□□□□ -1.99
ATPAF1Q5TC12 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.59□□□□□ -2
ATPAF1Q5TC12 ZNF204P-201ENST00000416749 2397 ntBASIC2.59□□□□□ -2
ATPAF1Q5TC12 AL035425.3-201ENST00000564206 4996 ntBASIC2.59□□□□□ -2
ATPAF1Q5TC12 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATPAF1Q5TC12 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
ATPAF1Q5TC12 MIR208A-201ENST00000362287 71 ntBASIC2.58□□□□□ -2
ATPAF1Q5TC12 RNU6-222P-201ENST00000362438 107 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms