Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PDCD5P2-201ENST00000507570 312 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 RNU2-10P-201ENST00000516375 211 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC090142.3-201ENST00000519012 385 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AP003049.1-201ENST00000529418 457 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC025423.5-201ENST00000550230 219 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 MIR4709-201ENST00000577272 72 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 MIR548AC-201ENST00000585049 88 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC242498.1-201ENST00000604134 111 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC243994.1-201ENST00000618627 109 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 RNU4-15P-201ENST00000362613 141 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 RNU6-960P-201ENST00000364056 120 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 RNU6-1245P-201ENST00000411130 106 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.44□□□□□ -2.34
RFX7Q2KHR2 MTND1P30-201ENST00000441241 901 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 AC073910.1-201ENST00000445047 438 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.44□□□□□ -2.34
RFX7Q2KHR2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.44□□□□□ -2.34
RFX7Q2KHR2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.44□□□□□ -2.34
RFX7Q2KHR2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.44□□□□□ -2.34
RFX7Q2KHR2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.44□□□□□ -2.34
RFX7Q2KHR2 AC079395.1-201ENST00000510981 262 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 MTCO3P28-201ENST00000513351 515 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 AC109446.1-201ENST00000566172 220 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 AL034555.1-201ENST00000604816 211 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 AC072039.2-201ENST00000608883 439 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 AL512427.1-201ENST00000618593 349 ntBASIC0.44□□□□□ -2.34
RFX7Q2KHR2 RNU6-35P-201ENST00000384530 107 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 MIR200A-201ENST00000384875 90 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 RNA5SP63-201ENST00000391225 112 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 MTCO1P21-201ENST00000416634 589 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AC114482.1-201ENST00000418010 247 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 MTND4P20-201ENST00000424125 869 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AL117351.1-201ENST00000438864 766 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.43□□□□□ -2.34
RFX7Q2KHR2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.43□□□□□ -2.34
RFX7Q2KHR2 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AC022447.4-201ENST00000504053 364 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 SNORA31.4-201ENST00000516049 129 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 MTND4LP25-201ENST00000570218 163 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 MIR3146-201ENST00000580367 79 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 AC068620.3-201ENST00000602749 560 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 7SK.7-201ENST00000603504 247 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
RFX7Q2KHR2 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.43□□□□□ -2.34
RFX7Q2KHR2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.43□□□□□ -2.34
RFX7Q2KHR2 MIR340-201ENST00000362125 95 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 SNORA63.3-201ENST00000362682 132 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 RNU4-56P-201ENST00000364700 142 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 SNORA32.2-201ENST00000384049 122 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
RFX7Q2KHR2 AL356776.1-201ENST00000406574 447 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.42□□□□□ -2.34
RFX7Q2KHR2 AL008629.1-201ENST00000438615 184 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 AC007969.2-201ENST00000441891 191 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 MTCYBP1-201ENST00000454315 1119 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.42□□□□□ -2.34
RFX7Q2KHR2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.42□□□□□ -2.34
RFX7Q2KHR2 MIR3136-201ENST00000583498 78 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 DEFB131E-202ENST00000602581 683 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 AC091965.4-201ENST00000607691 587 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.42□□□□□ -2.34
RFX7Q2KHR2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.42□□□□□ -2.34
RFX7Q2KHR2 RNU5E-7P-201ENST00000365290 117 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 RNU6-142P-201ENST00000384019 107 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 RNU6-413P-201ENST00000384115 107 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 MIR605-201ENST00000385078 83 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 RNU6-910P-201ENST00000390844 107 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 RPS26P5-201ENST00000418544 335 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AC063976.4-201ENST00000421971 163 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AC007327.1-201ENST00000447461 264 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 RNU7-34P-201ENST00000459394 64 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AP001893.2-201ENST00000526949 202 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AC011979.2-201ENST00000527568 352 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AC023050.2-201ENST00000544968 387 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 ADI1P3-201ENST00000549509 470 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AL442163.3-201ENST00000554110 156 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 AC110760.3-201ENST00000598794 467 ntBASIC0.41□□□□□ -2.34
RFX7Q2KHR2 RNU6-1123P-201ENST00000362347 106 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 RNU6-78P-201ENST00000362897 107 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 RNU4-67P-201ENST00000364569 141 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 RNU6-1026P-201ENST00000384465 108 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 RNU7-14P-201ENST00000459331 62 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 SNORD124-201ENST00000459577 104 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 BET1P1-201ENST00000482276 359 ntBASIC0.4□□□□□ -2.35
RFX7Q2KHR2 MTCO3P9-201ENST00000506989 781 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms