Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL445646.1-201ENST00000431784 216 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.56□□□□□ -2
PDS5AQ29RF7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.56□□□□□ -2
PDS5AQ29RF7 AP001025.1-201ENST00000486139 332 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 RPS27P26-201ENST00000494583 239 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 AC005741.1-201ENST00000511094 432 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.56□□□□□ -2
PDS5AQ29RF7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.56□□□□□ -2
PDS5AQ29RF7 AC078795.3-201ENST00000602913 472 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 CYP2C61P-201ENST00000604072 290 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 MIR3976-201ENST00000606807 139 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 RNU6-91P-201ENST00000607774 107 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.15-201ENST00000611544 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.16-201ENST00000613119 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.12-201ENST00000613778 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.20-201ENST00000613956 192 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.9-201ENST00000615427 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.11-201ENST00000616345 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.2-201ENST00000616535 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.3-201ENST00000617785 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.19-201ENST00000618602 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 RNU2-1-201ENST00000618664 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.6-201ENST00000619225 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.5-201ENST00000619465 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.56□□□□□ -2
PDS5AQ29RF7 U2.10-201ENST00000620268 191 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 AL669831.3-213ENST00000636676 183 ntBASIC2.56□□□□□ -2
PDS5AQ29RF7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PDS5AQ29RF7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.56□□□□□ -2
PDS5AQ29RF7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.55□□□□□ -2
PDS5AQ29RF7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PDS5AQ29RF7 RNU6-227P-201ENST00000362865 103 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 SNORD56.1-201ENST00000362913 68 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 Y_RNA.473-201ENST00000384333 102 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 RNU6-310P-201ENST00000384655 107 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 MIR504-201ENST00000385065 83 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 Y_RNA.579-201ENST00000390939 94 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 RNA5SP354-201ENST00000391247 136 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 Y_RNA.646-201ENST00000410980 101 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 HMGN2P3-201ENST00000433603 273 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 HMGN2P5-201ENST00000436882 273 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.55□□□□□ -2
PDS5AQ29RF7 MTCO3P10-201ENST00000455912 772 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 ACA59.1-201ENST00000515966 143 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.55□□□□□ -2
PDS5AQ29RF7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.55□□□□□ -2
PDS5AQ29RF7 AP001836.1-201ENST00000604675 523 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 AL356157.2-201ENST00000605122 111 ntBASIC2.55□□□□□ -2
PDS5AQ29RF7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.55□□□□□ -2
PDS5AQ29RF7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PDS5AQ29RF7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PDS5AQ29RF7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.54□□□□□ -2
PDS5AQ29RF7 Y_RNA.146-201ENST00000363549 102 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 RNU6-1059P-201ENST00000363752 98 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 RNU6-622P-201ENST00000384272 103 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 SNORA67.3-201ENST00000384366 140 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 AP000275.1-201ENST00000411943 390 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.54□□□□□ -2
PDS5AQ29RF7 AC009414.1-201ENST00000427200 443 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 AC004383.1-201ENST00000438135 289 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 RPS15AP7-201ENST00000439294 405 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 RPL7P42-201ENST00000481005 679 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 RNU6-1213P-201ENST00000517075 94 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.54□□□□□ -2
PDS5AQ29RF7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.54□□□□□ -2
PDS5AQ29RF7 AC005899.2-201ENST00000584353 90 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 AC019159.1-201ENST00000605094 187 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 AC024581.2-201ENST00000619986 252 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 AC241585.2-209ENST00000638217 143 ntBASIC2.54□□□□□ -2
PDS5AQ29RF7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.54□□□□□ -2
PDS5AQ29RF7 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PDS5AQ29RF7 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PDS5AQ29RF7 Y_RNA.2-201ENST00000362330 96 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 SNORD42.2-201ENST00000365570 69 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 RNU6-692P-201ENST00000384496 107 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 MIR767-201ENST00000390228 109 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AL591034.2-201ENST00000402839 359 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.53□□□□□ -2
PDS5AQ29RF7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.53□□□□□ -2
PDS5AQ29RF7 USMG5P1-201ENST00000425964 177 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.53□□□□□ -2
PDS5AQ29RF7 OSTCP8-201ENST00000445117 448 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AL031659.1-201ENST00000447075 539 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.53□□□□□ -2
PDS5AQ29RF7 AC012308.1-201ENST00000451232 178 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.53□□□□□ -2
PDS5AQ29RF7 RPL30P15-201ENST00000457129 321 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AL441985.1-201ENST00000457727 251 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AC027575.1-201ENST00000481064 460 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.53□□□□□ -2
PDS5AQ29RF7 AC093303.1-201ENST00000514549 295 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 RNU6-1170P-201ENST00000515974 106 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 AC093249.1-201ENST00000567049 203 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 MYL12BP1-201ENST00000569826 507 ntBASIC2.53□□□□□ -2
PDS5AQ29RF7 MIR5002-201ENST00000584713 97 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms